Shewanella yunxiaonensis: KDN34_05325
Help
Entry
KDN34_05325 CDS
T07775
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
syk
Shewanella yunxiaonensis
Pathway
syk02020
Two-component system
syk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KDN34_05325
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDN34_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syk03021
]
KDN34_05325
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
syk02035
]
KDN34_05325
Transcription machinery [BR:
syk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDN34_05325
Bacterial motility proteins [BR:
syk02035
]
Flagellar system
Flagellar assembly proteins
Stator
KDN34_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
QUN06870
UniProt:
A0ABX7YVQ0
LinkDB
All DBs
Position
1135092..1135814
Genome browser
AA seq
240 aa
AA seq
DB search
MNKMAAAYAGFDDKSSIVNQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEAAAKF
DGSKGAKFETFAGIRIRGAMIDEIRRGDWLPRSVHRNQRRIAQVIDELEQELGRDARDVE
IAERLEMPLDEYHHILSDVSCGKIIGIEDLGGAPDAFFADEMAADDTYEMLANNQFRDAL
AEAIKLLPERDALVLSLYYDEALNLKEIGAILDVSESRVSQIHSQAMLRLKAKLRHWTQN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaatggccgcagcgtatgccggttttgacgataaaagctcaatcgttaaccag
tatgcgccgctggtgaaacggattgcgcatcatttactggcacgcttaccggcttctgtc
caactggatgacctcctgcaagctggcatgatggggttgctggaagccgccgcaaagttt
gatggtagtaaaggcgccaagtttgagacttttgctgggatccgtattcgaggcgcgatg
attgacgagattcgtcgcggtgattggctaccacggtcggtgcatcgcaatcaacggcgc
attgctcaagtcattgatgaactggaacaggagttggggcgcgatgctcgcgatgtcgag
attgcggaacgactggaaatgccacttgatgaatatcatcacattctaagtgacgtatct
tgcggtaaaatcataggaattgaagatcttggtggtgcacctgatgcttttttcgccgat
gaaatggcggcagatgacacctatgagatgctggcaaataatcagtttcgtgacgctttg
gccgaggcgatcaaacttctgccggaaagagatgcgcttgttctgtcgctttattatgat
gaagcactcaatttgaaagaaattggcgctattttggatgttagtgagtctagagtcagt
cagatccacagtcaggcaatgctacgactcaaagctaagctcaggcattggacacagaat
taa
DBGET
integrated database retrieval system
