Shewanella yunxiaonensis: KDN34_05430
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Entry
KDN34_05430 CDS
T07775
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00521
Streptomycin biosynthesis
syk00523
Polyketide sugar unit biosynthesis
syk00541
Biosynthesis of various nucleotide sugars
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01250
Biosynthesis of nucleotide sugars
Module
syk_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KDN34_05430 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KDN34_05430 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KDN34_05430 (rfbC)
Enzymes [BR:
syk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KDN34_05430 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QUN06889
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All DBs
Position
1157818..1158366
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AA seq
182 aa
AA seq
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MNIIDTKIPAVKIIEPKVFGDGRGFFFESFNQQQFEAAVGYPVKFVQDNHSKSSKGVLRG
LHYQLPPYAQGKLVRCVVGEVFDVAVDIRETSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FVTISNTAEFLYKTTNYYSKESERSILWNDNQIGIIWPFDGELNLSEKDKLATKFLSSDL
FK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatcgacaccaagatccccgccgtaaagatcattgagccaaaagtatttggt
gacggacgtggttttttctttgaaagttttaaccagcagcaatttgaagcggcagtaggt
tatccagttaaatttgtgcaagataaccattctaagtcaagtaaaggggtattaagaggt
ttacattatcaattgcctccttatgctcaaggcaaattagttagatgcgttgtgggggag
gtatttgatgttgcggtggatattcgcgaaacttctccaacatttggaaagtgggttggg
gttaacctttcagcggaaaataagcgtcagctatggatcccagaaggattcgctcacggt
tttgtaacaataagtaacactgcggaatttttatataaaactacaaattattattcgaaa
gaaagtgaacgttcaattctgtggaatgacaatcaaataggaattatatggccttttgac
ggtgaactaaatttatctgaaaaagataagttggcaaccaaatttttatcatcagaccta
tttaaataa
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