Shewanella yunxiaonensis: KDN34_05500
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Entry
KDN34_05500 CDS
T07775
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00541
Biosynthesis of various nucleotide sugars
syk00552
Teichoic acid biosynthesis
syk01100
Metabolic pathways
syk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KDN34_05500
00552 Teichoic acid biosynthesis
KDN34_05500
Enzymes [BR:
syk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
KDN34_05500
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
CoA_binding_3
3Beta_HSD
KR
NAD_binding_4
adh_short
PglD_N
DUF4239
DUF3842
Motif
Other DBs
NCBI-ProteinID:
QUN06902
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Position
1170518..1172467
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AA seq
649 aa
AA seq
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MDFLQFLFSLKRNQKRAVSLVIDALFLSLAFWSALLVRIDDIAVLANPQHWLLLFIVVPL
SLVGFAKLGLYRAVLRYMGLQAITAIGVGVLLSAIMLVLFAFYIVDGQLPRTVPIIYASF
SLVFIGGSRAIVRSLVGSGLKRVGEPVIIYGAGVSGRQLFTALAQSREYYPFAFVDDDES
LHGTVIQGVHVHSPSIIRNLVKQKSATKILLAIPSASRSRRQAILEQLQSLAIQVLTLPA
MADLVSGKKLYSDIKEVEIDDLLGRDCVTPRADLLAANIRNKVVMVTGAGGSIGSELCRQ
ILKQCPKKLVLFELSEFGLYSIDRELNAIAKELSLDVQIYPMLGSVQRENRVQAVMEAFE
VQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTLYTAQAAIAANVEVFVLVSTDKAVRPTNV
MGTTKRMAELVLQALSDKGGPTRFSMVRFGNVLGSSGSVVPLFRTQIANGGPVTVTHPEI
TRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGQSVKIIDLATKMIRLSGFEVKDDNHPDG
DIVIEFTGLRPGEKLYEELLIGNNVTGTEHERIMTANEAFLTWGQLESILERLDKACHGF
QHEVIRDILLSTPTGFNPTDGICDLVWQQKADKKHSSGADSSNVVPLVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggattttttgcaatttttgtttagtttaaaacgtaatcagaaacgtgcagtcagtctc
gttattgatgcattgtttttgagtctagctttttggtctgcattgctcgttcgtattgat
gacattgctgtactggcaaaccctcaacattggttgctgctttttatcgtcgttcctttg
agcttagtgggttttgcgaaattaggcttatatagggcggtattgcgctatatggggttg
caagccattacggcgatcggtgtcggcgtgttgctttcggccataatgttggtccttttt
gcattttatattgttgacgggcagttgccgcgaactgtgccaataatttatgcatcattt
tctttagtgtttattggtggctctagggctattgtacgctcattggttggttcgggtttg
aaacgtgtaggggagcctgtaattatttatggtgccggcgtcagcggccggcagttgttc
actgccttggcgcaaagtcgtgaatattatccgtttgcgtttgtcgatgatgacgaatct
cttcatggtaccgtgattcaaggtgttcatgttcattccccctctattattcgtaattta
gttaagcaaaaatctgcaaccaagatactacttgctatacctagtgcatctcgctctcgt
cgtcaggccattttggagcagttgcaatcgttagccatacaagtgctgacattgcccgct
atggctgatttggtgagtggtaaaaagctttatagcgacattaaagaagttgaaatcgat
gatttgctcggtcgcgattgtgtgactcccagagctgatctgttggcagccaatatccgt
aataaagtcgtgatggtgaccggggctgggggctctatcggttccgagctatgcaggcag
atcctgaagcaatgtcctaaaaaattggtgttgttcgagttgtctgagtttggcctttat
tccattgatcgtgaacttaatgctatcgctaaagagctttctcttgacgtgcaaatatat
ccgatgttgggttcagtgcagcgggagaatcgagttcaggcggtcatggaagctttcgag
gtgcagacagtttatcatgctgcggcatataaacatgttccgcttgtcgagtataacgtt
gtggaaggtgtgcgtaacaatgtgttcggaaccttatacactgctcaggcggctattgcg
gcaaacgttgaagtatttgtattagtaagtacagataaagcagttagacccaccaatgtc
atggggacaactaaacgtatggctgagttggtcttgcaagctctgtcagataaggggggg
cctactcgttttagtatggttagatttggtaatgtattaggctcttctggatctgttgtt
ccactattcagaacgcagattgccaatggtggtcctgttacagtaactcatccagaaatt
actcgtttctttatgaccatacctgaagcttctcagctggtgatacaagcaggtgcaatg
ggtaaaggcggggatgtttttgtgttagatatgggccagtcagtaaagattattgatttg
gcaactaaaatgattcgactaagtggctttgaagtaaaagatgataaccatcctgatggt
gatatcgttattgaatttacaggcttgcggccaggtgaaaagctttatgaagagttgctt
attggtaacaatgtcactggcactgagcatgagcggatcatgacggcaaatgaagccttc
ttaacgtggggacaacttgaatcgatcttggaacgattagataaagcttgtcatggattc
cagcatgaagtgataagagatattcttctttctacaccgactggctttaatccaactgat
ggtatttgtgacttagtttggcaacagaaagctgacaaaaaacatagtagtggcgcagat
agcagcaatgtcgttcccttagtttcctag
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