Shewanella yunxiaonensis: KDN34_06250
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Entry
KDN34_06250 CDS
T07775
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk03030
DNA replication
syk03430
Mismatch repair
syk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDN34_06250 (dnaX)
03430 Mismatch repair
KDN34_06250 (dnaX)
03440 Homologous recombination
KDN34_06250 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syk03032
]
KDN34_06250 (dnaX)
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_06250 (dnaX)
Enzymes [BR:
syk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDN34_06250 (dnaX)
DNA replication proteins [BR:
syk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDN34_06250 (dnaX)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDN34_06250 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_14
PIF1
ResIII
AAA_30
AAA_2
AAA_7
RCF1-5-like_lid
TsaE
AAA_18
AAA_assoc_2
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QUN07033
LinkDB
All DBs
Position
1320222..1322702
Genome browser
AA seq
826 aa
AA seq
DB search
MSYQVLARKWRPASFEQVVGQSHVLHALVNALNQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGITATPCGKCSACQEISQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ
DEIAKQLQHIVTAEALPFEAQALTLLAKAANGSMRDALSLTDQAIAFGAGQIKLQQVQTM
LGAIDERQVVSLLQALINADIAPLMQEAERILAFGADANEVLRSLLELLHQITLTQFAPA
AAQLSLYATQIQEFAQQLSAEQVQLYYQLLLQGRKDLPFAPDPKSGLEMALLRAVAFVPE
TSPKRWGEVGTKATVTMTTPAAVTSIPVSQPVRQLEPVLSSIPNNELAETSALAAAASSV
SAINDPAAEVAEVIDDDDENDDAFAAEQSLILSQAESMGHRYQAEPSVADIMSDSAVDLS
DDEPPFKDELTTDMFATEMSVDVEASSTDDNESALSAAVSEPLFGDDVLDQVLATRDLLL
QDIDALANDEAPVVISEHHQNNPSKKNAESSVKEIASANEMAASNDSLSVEASSCAVDEA
GEDDNGDVYSDWLAQSTEVESDQTLGPSALLTAEAIENADPLDATMSAATISSSDATVNS
NIDVTAADKPVAVTAMAAPSGNPADLAWYKLVSAMPIRGRVRQLAANSVCLSLTEKCTLV
LKPDQKHLAAVAAISQLQEALAEALQRPLTVEFSVGSDSTRETPQEIRQRFKNELLADAE
QKLMADANVRWLKQHMGADLVPDSLSYNPEQLAHKTALIPDGQLPQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaggtgttagcccgtaagtggcgacctgccagttttgaacaagtcgtaggg
cagtcacatgtcctgcacgcccttgttaacgcgctgaatcagcaacgactgcatcatgcc
tatctttttactggtacccgcggtgtgggtaaaaccagtctggcacgtttatttgcaaaa
gggcttaactgtgagcaaggcatcactgcaactccttgtggtaaatgtagtgcgtgtcag
gaaatctctcagggacgttttgttgacctgattgaggtggatgcggcttcacgaacaaaa
gtcgatgatacccgggaattattggataacgttcagtatcgtcccactcgtggtcgtttc
aaggtgtacctcattgacgaagtacatatgctgtcgcgcagcagttttaatgcattgctg
aaaacgcttgaagagccgccagagcacgttaagtttttgctggcaaccacagatcctcag
aaacttcccgtcaccgtgttgtcacgctgtctgcaattcaatttgaagagcctgacccag
gacgaaatcgccaagcagctgcagcatattgtgacagctgaagctttgccgtttgaggcg
caagcgctgacattgttggccaaggccgctaacggcagtatgcgtgacgcactcagtctg
accgaccaggcaatagcctttggtgccggacaaataaaactgcagcaagtgcagactatg
ttgggggccattgacgaacgtcaggtcgtctcattattgcaagcattgataaacgcggat
atcgcccccttgatgcaggaagctgaacgtattttggcttttggtgctgatgccaatgaa
gtgctacgcagtctgctggaactgttgcatcagatcaccctcacacaatttgcgccagcg
gcggcacagctgtcgctatatgcaacacagatccaggagtttgctcagcaactgtcagca
gaacaggttcaactttactatcaattattgctgcaaggacgtaaagacttgccatttgct
ccagatcctaaatcgggtttggagatggcattattacgagcggttgcattcgtgccagaa
acttcgcctaaacggtggggtgaagtaggtactaaagccactgtcactatgacgacgccc
gctgcagtgacatcgataccagtttcacaaccggttcggcaattggagccggtcctatcg
tccattccaaacaatgaactcgctgaaacctcagcattagcagcagcggcatcttctgtt
tcggctatcaatgatcctgcagcagaagtcgcggaagttatagacgatgatgacgagaac
gacgatgcttttgccgctgaacaatcgctgattttatcccaggcagaaagcatgggacat
cgctatcaggcagagccatcggtggcagatatcatgtcagatagtgctgttgacttgtca
gacgatgagccgccgtttaaggatgaattgaccacggatatgtttgcgacagaaatgtct
gtagatgttgaagcgtcatcaaccgacgataacgaatcggcattatccgcagctgttagt
gaaccgctgtttggcgacgatgtgctggatcaggtattggcgacgcgcgatttgttatta
caagacattgatgcgctggcgaacgatgaagcgccagtcgttatctcggaacatcaccaa
aataacccctcaaaaaaaaacgctgaaagttctgtaaaggaaattgcttccgctaatgaa
atggcggctagcaatgatagtttatccgtagaagcctcatcgtgtgctgttgatgaggcg
ggtgaagatgataatggcgatgtttatagtgattggctagcacagtccactgaggttgag
tcggaccaaactctggggccgtcagcactattaaccgctgaggctatcgaaaatgctgac
cctctagacgcgaccatgtcagcggcgacgatatcgagtagcgatgcaactgttaactcc
aatatcgacgtgactgcagcggataagccggtagcggtgactgcaatggcggcaccttca
ggaaatccagccgatttagcttggtataagttagtgtcggcgatgcctattcgtggacga
gtcaggcaattggcggcaaattccgtgtgtctgtctctcactgaaaaatgtacgttggta
cttaagccggatcagaagcatttagcggcagtagcggctatctcgcagttacaggaggcg
ctagctgaagcattacaacgcccattaacagtagagtttagtgtcggttctgactccaca
agagaaaccccgcaagagatccgccagcgtttcaaaaatgaattgttagccgatgctgaa
cagaaactgatggctgacgcaaatgtgcgttggttaaaacaacatatgggagcagacctt
gtgcctgactccctcagctataacccagaacaattggcgcataaaaccgccttaattcct
gatggacagctgccgcagtga
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