Shewanella yunxiaonensis: KDN34_06560
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Entry
KDN34_06560 CDS
T07775
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00910
Nitrogen metabolism
syk01100
Metabolic pathways
syk01120
Microbial metabolism in diverse environments
syk01310
Nitrogen cycle
Module
syk_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
KDN34_06560 (nirB)
Enzymes [BR:
syk01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
KDN34_06560 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
FAD_binding_2
Pyr_redox_3
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QUN07087
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Position
1406170..1408722
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AA seq
850 aa
AA seq
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MSNTKPKLVIVGNGMVGHSFVEQLCEQRLQQQLEVLVIGAEKRVAYDRVQLSSYFNGAAL
DDLAMTTAEQYAEWGVSLKLGVAVVGIDSDAKQLLLADGSRENYDKLVLATGSYGFVPPI
NGRERDGCMVYRTTDDLLAIEAAAKNAKTGVVIGGGLLGLEAANALKLLGLKTHVVEFAP
QLMPVQLDAKAGALLQDKIAALGVEIHTSKVTQEIVDGETGRLRLKFADGELLDTDMLVF
SAGIRPYDNLAETCALEKGARGGYAVDNFCQTTVADVYAIGECASWQDRIFGLVAPGYQM
AKIALGHIAHSLDIAEQHSGDFLGADMSTKLKLMGVDVAAIGNSRGSDDTRFVELMDEPA
GIYKKLWLNDAGNVITGALLVGDTSDYGTLLNLYLSGHKIEGSAAALLLSGDAPALPKSN
NDLICSCHQVSRGSILNAVADGAASLGDIKRCTKAASGCGGCSASVQKVINEGLAAQGVE
VSKALCSHFEYSRQELFHLCQVEGIKDFATLLAKYGKSHVHGVGCNTCQPAAASIFASLY
NGHVLSESRDQLQDTNDAFLGNLQKDGTYSVVPRIAGGEITPDKLIAIGEVAKRYDLYTK
ITGGQRIDLFGAQLSDLPEIWESLIDAGFETGHAYGKSLRTVKSCVGNTWCRYGVQNSVG
MAIELENRYKGLRSPHKLKMAVSGCTRECAEAQGKDIGVIATDKGWNLYICGNGGMKPRH
ADLFASDLNDAELVDLIDKVLMFYVRTADKLQRTSVWLESLDGGLDYLKQVILEDSLGIG
DELLSQMQTVVDNYQCEWKTSVETPELRARFSEFINPQAAPECAVLQYQRVRGQRIPVIN
VAPATEEETL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacaaaaccaaaactggtcatagtcggcaatgggatggttggtcacagcttc
gttgaacagttgtgtgaacaacgcctgcaacaacagctagaggtgttggtgatcggcgca
gaaaaacgtgtggcgtatgatcgcgtgcagttgtcatcttattttaatggtgccgcacta
gatgatttagcgatgactaccgctgagcaatatgccgaatggggcgtgagcttaaaactt
ggtgtagcggttgttggtatcgacagtgacgctaaacagctactgcttgctgacggcagt
cgtgaaaactacgacaagctggtactagcgactggctcctacggttttgtcccgccgatt
aatggccgcgagcgcgatggctgcatggtgtatcgcactactgatgacttactggcgatt
gaagccgctgcaaaaaatgccaaaactggcgtggtcattggtggtggcttgctcggcttg
gaagcggctaatgcgctgaaactgctcggtttgaaaacccatgtggtggaattcgccccg
cagttgatgccggtgcagctcgatgccaaagcaggtgcactgttgcaagacaaaatcgcc
gcacttggcgtggaaatccataccagcaaagtcacgcaagagattgtcgacggtgaaacg
gggcgtctgcgcctcaagtttgctgacggtgaactgctcgacaccgacatgttggtattc
tcagccggtattcgtccctacgacaatctggctgaaacctgtgcgctggagaaaggtgct
cgcggcggttacgccgtcgataacttctgccaaactactgttgctgatgtttacgccatc
ggcgaatgcgccagttggcaagatcgtatctttggcttagtcgcgcctggctaccaaatg
gcgaaaatcgccttggggcacatcgctcattcccttgacatcgccgagcaacacagcggt
gacttcttaggtgccgatatgagcaccaagctcaaattgatgggcgtggatgtggccgcc
attggtaacagccgtggtagcgacgacacccgttttgttgaactgatggatgagcctgcg
ggcatctacaaaaagctgtggctcaatgatgcaggtaacgtgatcaccggcgcgctgctg
gtgggcgataccagtgattacggcacgctgctgaacctctatctcagcggccacaagatt
gaaggtagcgcagccgccttgttgctgtctggtgatgcgccagccttgccaaaatccaat
aacgatttgatctgctcctgccatcaggtgagccgtggcagcattctcaatgccgtggct
gatggtgcggcgtcgcttggcgatatcaagcgttgtaccaaagcggcgtctggctgcggc
ggttgctctgccagtgtgcagaaggtgatcaacgaaggcttagcggcgcaaggtgttgaa
gtgagcaaagcgctgtgcagccacttcgagtacagccgtcaggagctgttccacctgtgc
caagtggaaggcattaaagacttcgccaccttgctggccaaatacggtaaatcgcatgtt
cacggtgtgggttgtaacacctgtcagcctgccgctgcgtcaatttttgcctcgctctac
aacggtcatgtgttgtcagagagccgtgatcaactgcaagacaccaacgatgccttcctc
ggcaatctacaaaaagatggtacttactcggtggtaccgcggattgccggtggcgaaatc
acccccgacaaactgattgctatcggtgaagtcgccaaacgttacgacctctacaccaaa
atcactggcggtcaacgcatcgacctgtttggtgcacaactatctgacttacctgaaatt
tgggaaagcctgattgacgcgggctttgaaactggccacgcctacggtaaatcgctgcgc
accgtgaaatcttgtgtcggcaatacctggtgtcgctacggcgtacaaaattcagtcggc
atggcgattgagctggagaatcgctacaagggcttgcgctcacctcacaaattgaagatg
gccgtttccggctgtacccgcgaatgcgctgaagcgcagggcaaagatatcggcgtaatc
gccaccgacaaaggctggaacctctatatttgcggcaacggcggcatgaaaccgcgccat
gcagatctatttgccagtgatttgaacgatgccgagctggtggatctgatcgacaaagtg
ttgatgttctatgtccgcaccgccgacaaactgcaacgtacttcggtatggcttgaaagc
ctggacggcggtcttgattacctcaaacaagtgattttagaagactcgctcggcatcggt
gatgagctgttaagtcagatgcaaaccgtggtcgacaactaccaatgcgagtggaaaacc
agtgttgaaacccctgaattacgtgcgcgcttcagtgagttcatcaatccgcaggctgcg
ccagagtgcgctgttttgcagtaccaacgggtgcggggccaacgcattcccgtcatcaat
gtagcaccagcaactgaggaggaaaccctatga
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