Shewanella yunxiaonensis: KDN34_06910
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Entry
KDN34_06910 CDS
T07775
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_06910
Transporters [BR:
syk02000
]
Other transporters
Pores ion channels [TC:
1
]
KDN34_06910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QUN07151
LinkDB
All DBs
Position
1488714..1490621
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AA seq
635 aa
AA seq
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MQKCVMAQLLSVLALSISHQLWADDGEMERMVVTASAKDQQLSTAPASISVIDAEEIKQM
PVKDLGDVLRSSVGVSVNTGTGGRNDIYIRGMGQGYVLMLINGKRVSSSNGLWRGGNFDV
TAIPVDAIARVEVVRGPMSALYGSDAVGGVINVITKQPDEHWELTLDTEYSAMTDGDGGD
RTRSNLFGTGKLTDTLGVMFTAETADQDTWNNEELTPAYDSIEERNTKKLYTAFNWQVAD
NQTLDLDYQYDNDKVPLTNYSATAQREQKIERNTLSLTHKGEWGWGGTELMAYREKSAMY
DYNTQYRLQPPLGRDIDEINTIYRGTAFVPAFSQDLTIGGEYHKTEVADVVQYPTTGGDS
SEQYSLFVQDQFDLLQQFSLTLGGRYDDNQDYGERFSPRAYLVYNADNGLVVKGGVGTAF
RAPSLYESSATFASVSCGGACNLTGNPNLKPETSVNYELSAMWHQPTYELSATVYHNRVK
DLITVETWDRVSATRTYYNEDEVTLQGIEFTGNMDLTADISLNGNYSYLDTETGTGEELT
GRPRQTANLKLDWHLTDAFMLYASGNYYGSHLNSSAERKSGYTLLDFGGNYQVNDHVKLR
AGLTNITNQEPAKDDEDTEIILPGRAVFVGLTLSL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatgtgttatggcgcagttgttgagtgttttggcgttatccataagccaccag
ttatgggccgatgatggtgagatggagcgaatggtagtcacggccagcgccaaagaccaa
cagctaagcaccgcacccgcatccatttcagtcatcgacgccgaagaaatcaaacagatg
ccggtaaaggatttaggtgacgtattacgttcaagtgtcggtgtcagtgtcaacaccggt
acgggggggcgtaatgatatttatattcgtgggatgggccagggttacgtgttgatgcta
attaacggcaaacgcgtgtcttcctctaatggcttatggcgtggtggcaattttgatgtc
acggccattccggttgatgctattgcgcgagtggaggtggtgcgtggccctatgtctgcg
ttgtacggttctgacgccgtaggtggggtaatcaacgtcattaccaaacagccggatgaa
cactgggagctgacactcgataccgaatatagtgccatgaccgatggtgatggtggtgat
cgtacccgcagcaacttgtttggtaccggtaagctaacggatacgttaggcgtgatgttt
accgctgaaacggcggaccaagatacatggaataatgaggaactgactccggcatacgat
tctattgaagaacgcaataccaaaaagctttataccgcgtttaactggcaggtagcagat
aatcagacgctcgacctcgattatcaatatgacaatgacaaggtcccgctgactaactat
tcagccacggcccagcgtgaacaaaaaatcgaacgtaataccttaagtctgacccacaaa
ggtgaatggggctggggcggcacagaactgatggcgtatcgtgaaaagtcagccatgtat
gattacaacacgcaatatcgcctgcaaccgcccttaggtcgtgacattgatgaaatcaac
accatttatcgcggcacggcctttgtccctgctttttcgcaggacttgaccatcggtggc
gaataccacaagacagaagtggcggatgtcgtccagtacccgactaccggtggcgatagc
tcggaacagtattcgctcttcgttcaggatcagtttgatttgctgcaacagtttagtctg
acgcttggtggtcgctatgatgacaatcaagattatggtgagcggtttagtccgcgggca
tatttggtatataacgcagataatggcttagttgtgaaaggcggcgtgggtactgcgttt
cgggcaccatcactatacgagtcttctgcgacctttgcttcggtcagttgtggtggagcg
tgtaatcttacgggtaaccccaatctcaaacctgagaccagtgttaactatgagctgtcc
gctatgtggcaccagccaacctatgaactctcggctacggtatatcacaatcgggtaaag
gatctgatcaccgttgaaacttgggaccgtgtcagtgcgactcgtacgtattacaacgaa
gatgaagtgactttgcaggggattgagttcactggcaacatggatttaactgcagatatt
agtctgaatggcaactacagttatctcgatacggaaaccggaacaggcgaagaactgacg
ggacgtcctcgtcagacggctaatctgaaactcgattggcacttgaccgatgcgtttatg
ttgtatgcgtctggcaattactacggctcacatctcaatagcagtgccgagcgtaaaagt
ggttatacgctgttagattttggtggtaattatcaggttaatgaccatgtgaagttgcgt
gccggtctgaccaacatcactaatcaggaacctgcaaaagatgatgaagatactgaaatt
attttgcctggtcgggcggtattcgtcggacttacattaagtctttaa
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