Shewanella yunxiaonensis: KDN34_07020
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Entry
KDN34_07020 CDS
T07775
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDN34_07020 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_07020 (xthA)
Enzymes [BR:
syk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KDN34_07020 (xthA)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KDN34_07020 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QUN07173
UniProt:
A0ABX7YWI3
LinkDB
All DBs
Position
complement(1513250..1514065)
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AA seq
271 aa
AA seq
DB search
MKIVSFNINGLRARLHQLQALIDCHQPDIIGLQETKVHDEAFPLAEVEAMGYQVQYHGGK
AHYGVALLSKVEPLKVHKGFPTDAEDAQRRLIAGEFMQANGRLLTVINGYFPQGENIAHE
VKYPAKRKFYADLMRWLSSSFSPEQDIAIIGDMNISPIDLDIGIGDVNAKRWLQTGKCSF
QPEERQWFNTLLDWGLVDTFRQLHPQREQRYSWFDYRSRGFDDNRGLRIDTILASAPLAL
RLKESDVDYDLRSMEKPSDHAPIWSTFDCGK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtttcattcaatatcaatggattgcgtgcgcggctccatcagttacaagcg
ttgattgactgccatcagccagacattattgggcttcaggaaacaaaagtgcacgatgaa
gccttcccattagctgaagttgaagcgatgggttaccaagtacaatatcatggcgggaaa
gcccattatggcgtggctttactgtcaaaagttgaaccattgaaggtgcataaaggcttt
cccacagatgccgaagatgctcagagacgtctgattgcaggagagtttatgcaagctaac
gggcgtctattaactgtcatcaacggttacttcccgcaaggtgaaaacattgcgcatgaa
gtgaaatatcctgccaaaagaaagttctatgctgatttaatgcggtggttgagcagcagc
tttagtcctgaacaagatattgcgattattggcgatatgaatatctcccctatcgatctt
gacatcggcattggtgacgttaacgccaaacgctggttacaaacagggaaatgcagtttt
cagcctgaagagcggcaatggtttaacaccttattggattggggacttgtcgatacgttc
agacaacttcatccgcaacgggaacaacgttactcttggtttgattaccgcagtcgtgga
tttgacgacaatcgaggcctgcgcattgacaccatcctcgcaagcgcacctttagctctg
cgtttgaaggagtcagatgtagattatgatttaaggtccatggaaaaaccttcagatcac
gcacctatctggagtacgtttgactgcggcaaataa
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