Shewanella yunxiaonensis: KDN34_07185
Help
Entry
KDN34_07185 CDS
T07775
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syk03016
]
KDN34_07185 (truA)
Enzymes [BR:
syk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KDN34_07185 (truA)
Transfer RNA biogenesis [BR:
syk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KDN34_07185 (truA)
Prokaryotic type
KDN34_07185 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QUN07562
LinkDB
All DBs
Position
1557505..1558290
Genome browser
AA seq
261 aa
AA seq
DB search
MRIALGVEYDGSGYFGWQKQAEVDSVQGQLERALSIVANEPIELQCAGRTDAGVHATGQV
VHFDTTAIRNDGAWTLGVNANLPDNIAVRWMKVVPEDFHARFSATARRYRYIIYNHNFRP
GILRLGVSHYHGELDVAKMHEAAQYLLGENDFTSFRAVQCQSKTPFRNLHRISVSRQGMY
VIVDVEANAFLHHMVRNIVGSLLEVGLGNQPVDWLGQLLALKDRTKAAATAKPHGLYLVH
VTYPEHFNLPTVAAGPLFLAD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcgctaggcgtagagtatgacggcagtgggtattttggctggcagaaacaa
gctgaagtggattcagtacaagggcagttagaacgcgcattatcgatagtggccaacgaa
cctattgaattacaatgtgctggtcgcactgatgccggtgtccatgctaccgggcaggtg
gtccattttgacactacggctatccgtaacgatggcgcttggaccttaggtgtaaacgct
aatctgcctgataatatcgcggtgcgttggatgaaggtggtgccagaagattttcatgcg
cgattctccgcgactgccagacgttatcgttacattatctacaatcataattttcgtcct
ggtattttgcgtcttggggtgagtcattaccacggtgaactggatgtcgctaagatgcat
gaagctgcgcaatatctgcttggcgaaaacgatttcaccagttttcgggcggtacagtgc
cagtcaaaaactccgtttcgtaacctgcaccggatcagtgtcagtcgccaaggaatgtat
gtcatcgttgacgttgaggcgaacgcttttcttcatcatatggtgcggaatattgtgggt
tccctgttggaggtgggcttgggcaatcaacccgttgattggcttggtcaattgctggca
cttaaagatcgtactaaagcggctgccactgccaaacctcacggtttatatttggtgcat
gtgacttatcctgaacattttaacctgcctactgttgctgctggcccgttatttttggcg
gattga
DBGET
integrated database retrieval system
