Shewanella yunxiaonensis: KDN34_08115
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Entry
KDN34_08115 CDS
T07775
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_08115
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KDN34_08115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
AAA
AAA_22
DUF7577
Zn_Ribbon_1
DZR
SLFN-g3_helicase
T1R_D3-like
zf-tcix
zf-ChsH2
Terminase_3
ATP-synt_C
LBD_receptor
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QUN07355
LinkDB
All DBs
Position
complement(1761463..1763217)
Genome browser
AA seq
584 aa
AA seq
DB search
MSDSHSIKLRDYQQGAVDAAISYFRHQHGSAVIVLPTGAGKSIVIAELARIARGKVLILT
HVKELVAQNADKASLLTDDISVYSAGLNQKLSSGKVVVAGIQSAARNPQAFSQAFSLVII
DECHRVSDDDQSQYHQLLQQLRQHNPKLHLLGLTATPYRLGSGWIYKRHYHGRVGNLDAG
IFDDCIFELPLRPLIKQGYLTPPRLLDGLSAQYDFSQLKPDNHGNYNAAEVDSLLDHSGR
ATSAIVTQLMQLAKSRRGVIIFAATVRHAQEIIALLPETAALITADTPGAERDTLIGKFK
QQQLQFLVNVSVLTTGFDAPHVDLIAIMRPTASVGLFQQMVGRGLRLYEGKQDCLIIDYA
ANGFDLYSPQISQPRPTADTVPVQVVCPECGFANIFWGKTSNQGEILEHFGRRCQGLVAR
ASKSQQCSYRFRARLCPDCGAENDIAARACVECHSQLVDPDKRLKEVLEQKHHHLFRVQQ
MQLVATTSGLTVEYIDLDGNHFNEHFRLTTAAQRKALCAVFLYPHDKTPGLPLPSFRNSE
ELLAHSTRWRSPDLLLLKKQGKHWVLLEKYFDYHGRYQTEQTYC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtcattccataaagttacgtgactatcaacaaggcgctgtggatgcggca
attagttactttcgccatcagcatggcagtgctgtaatcgtattgccaacgggagcaggt
aaaagcattgtaattgctgagcttgcacgaattgcccgcgggaaagtgttgatattaacg
cacgtcaaagaactggtcgcacaaaatgctgataaagcatcactgctaacagacgatatt
agcgtttattcagccgggttaaatcagaaactcagtagcggtaaagtagtagtggcgggg
attcagtcagcagcgcgcaatccacaagcattcagccaagcgttctcactggttatcatt
gatgaatgccaccgagtcagcgacgacgatcagagtcaataccatcaattattacaacag
ttgcgccagcataatcccaaactgcatcttctggggctcaccgcaaccccctatcgactt
ggcagcggctggatatacaaacgtcattatcatggtcgggtaggcaaccttgatgcgggc
atttttgacgactgcattttcgaattaccgttacgcccgttaatcaaacagggatatttg
acaccgccaagattattggatgggttatctgcacagtatgatttcagtcaattaaagccg
gacaatcatggcaattataatgctgccgaagtcgactcgttactcgatcatagtggtcgg
gcaacctcagccattgtgacgcagctaatgcagttggcgaaaagtcgtcgcggcgtaatt
atatttgcggcgacagtgcgccatgcccaggaaataatcgcgctacttccggaaaccgcc
gcgctaattacggcagacacgccgggtgccgaacgagatacgctcatcggtaagtttaaa
cagcaacagctgcaatttttagtgaatgtatcggtacttaccacgggatttgacgcccct
cacgtcgatctgattgcgatcatgaggccgacggcatctgtaggacttttccagcaaatg
gtcggccgggggctgcggctatatgaaggaaagcaggattgcctgatcatcgattatgcg
gccaacggttttgatctctatagtccgcagatcagtcagccgcgcccaacagccgacacc
gtgccagtacaagtggtgtgccctgaatgtggttttgccaatattttctggggtaagacc
agtaatcaaggggaaatccttgagcattttggcagacgttgtcagggacttgtggctagg
gcttcaaaatcacaacaatgtagttatcgttttagggcgcgtttatgccctgattgcggg
gcagaaaatgatatcgcggcaagagcctgcgttgaatgtcattcacagctggttgacccc
gacaagcgcctcaaagaagtgttagaacaaaaacatcatcatctgtttcgtgtgcagcag
atgcaactcgttgcaaccacctcagggctgaccgttgagtatattgatcttgatggtaat
cactttaatgaacattttcgcttaacaacagcggctcaacgcaaagcgttatgtgcagta
tttctatacccgcacgataaaaccccagggctccccctgccttcttttcgcaactcagaa
gaattattagcgcactcaacaagatggcgttccccggatcttttgttattaaaaaagcag
gggaaacactgggtgttattggaaaaatattttgattaccacgggcgttaccagactgaa
caaacatattgttga
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