Shewanella yunxiaonensis: KDN34_08125
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Entry
KDN34_08125 CDS
T07775
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KDN34_08125 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syk01007
]
KDN34_08125 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syk03016
]
KDN34_08125 (pheT)
Enzymes [BR:
syk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
KDN34_08125 (pheT)
Amino acid related enzymes [BR:
syk01007
]
Aminoacyl-tRNA synthetase
Class II (U)
KDN34_08125 (pheT)
Transfer RNA biogenesis [BR:
syk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KDN34_08125 (pheT)
Prokaryotic type
KDN34_08125 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
QUN07357
LinkDB
All DBs
Position
1764463..1766850
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPAVSRDQLAQQITMAGLEVDEVVAVAGSFSGVVVGEVVECAQHPDAD
KLRVTKINVGGEELLDIVCGAPNCRQGLKVCVATVGAVLPGDFKIKKAKLRGQPSNGMLC
SYSELAIDIESDGIIELPLDAPLGVDVRKYLDLDDAVIDVDLTANRADCLGMVGIAREVG
VLNRMAVTEPSWQSAAATIDASVSVKVLAKDACPRYLSRVVKNVDVKAATPAWMVEKLRR
SGIRSIDPIVDITNFVLVEYGQPMHAFDLEKIDGDLTVRLGDGKEQLTLLDGSEITVPAD
TLVIADNNKALALAGIFGGEHSGVSAETQDIVLECAFFAPLAIMGKARNLGLHTDASHRF
ERGVDPQLQHKVMDRATRLILDICGGEAGVIVEAKSEEYLPQPVEITLRRSKLDKLLGHH
VPDNDVAEILARLGFVVKTIESGWQVTTATYRFDMAIEEDLIEEVARIYGYNSIPNEAPL
ARLNMTRHSEANVKLAKVRDLLTARSFQEAITYSFVDPKLQQLVHPQQQALVLPNPISSE
MSAMRLSLFTGLLGAVGYNQARQQGRVRLFETGLRFIPDDSAEMGVQQQAVLAAVIAGPQ
SDEHWTIESKSVDFFDLKGDLEALIGLTASEAEFSFRSASHSALHPGQCAEILRNNQVVG
VIGAVHPALEKPFGLNGKTIVFELQLDALLQGAVPQAKAISKYPANRRDIAVVVDEAVIA
ENILSTIKKVGGNQLVGLNLFDVYRGKGVEPGKKSLAIALTLQDNARTLEEKEIAATVES
VVSVLKSEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaatcctggcttcgtgagtgggttaatcccgcggttagccgtgatcag
ttagctcagcaaatcactatggctgggcttgaagttgatgaagttgttgcagtcgctggc
agcttttctggcgtagtcgtgggggaagtcgttgaatgcgctcagcatccagatgctgac
aaactgcgcgtaacaaaaataaacgttggcggcgaagagctgctggatatcgtttgtggt
gctccaaactgtcgtcaagggttaaaagtgtgtgtagccactgtaggtgcagtgctgcca
ggcgactttaaaattaaaaaagccaaactgcgcggacagccatccaacggcatgctgtgt
tcttacagtgagttggcgattgatattgaaagtgacggtatcattgagttaccactagac
gcgccattaggtgttgatgttcgcaaatatcttgacttggatgatgcggtcattgatgtg
gatttgacggctaaccgtgcggactgtctcggcatggtcggtattgcccgcgaagtcggt
gtgctcaatcgtatggctgtgaccgagccaagttggcaatcagcggcggcgacgattgat
gctagtgtcagtgttaaggtgctggccaaagacgcttgtcctcgctatctcagccgtgtt
gtgaaaaatgttgatgtcaaagctgccactccggcatggatggtggaaaagttgcgtcgt
agtggtattcgctccatcgatcctatcgtggatatcaccaattttgtgctggtggaatat
ggccagccgatgcatgcgtttgatttggaaaagattgatggcgatctgactgttcgcttg
ggtgatggtaaagaacaactgacattgcttgatggtagtgaaatcactgtgcccgctgac
acactggtgattgccgataacaataaggcccttgcactcgccgggatttttggcggtgag
cattcaggcgtttccgcagaaacccaggatatcgtgctggaatgcgcattttttgcgcct
ttggcaatcatgggtaaggctcgtaacctcggcttgcacaccgacgccagccaccgtttt
gaacgtggtgtcgatcctcagttacagcacaaagtgatggatcgcgcaacgcgtctgatc
ctagatatttgcggtggtgaagccggcgtcattgttgaagcgaaatctgaggaatattta
cctcaaccggtagaaatcacattgcgtcgcagtaagctcgataagttgctggggcatcat
gtgccggataacgatgtggcggaaattcttgcgcgtttgggcttcgtcgttaaaacgatt
gaatccgggtggcaagtcactacggcaacttaccggtttgatatggcgattgaagaagat
cttatcgaagaagttgcgcgaatttacggttacaacagtattcctaacgaagcgcctttg
gcacgtttgaacatgacacgtcacagtgaagccaatgtcaaattagcaaaagtgcgagat
ctgttgacggcaagaagttttcaagaagctattacttatagttttgttgaccctaaattg
cagcaattggtacatcctcagcaacaggcattggtattacccaatccgatctcgagtgaa
atgtcagcaatgcggctttcactgttcactggattgttgggagcagtgggttataaccaa
gccagacaacaaggccgagtcaggttatttgaaactggtttgcgctttattcctgatgat
tcagcggaaatgggtgtgcagcagcaagcggtgttagccgcagtgattgccggaccgcag
agtgatgaacactggacgattgaatcaaaatcggtagattttttcgacttaaaaggtgat
ttagaagcgcttattggcttgacagcatcagaggctgaatttagctttagaagtgcttcg
cactctgcgctgcatccaggacaatgtgctgaaatcctgaggaataatcaggtcgttggg
gtcatcggtgccgttcatcctgcgttagaaaagccgttcggtctgaatggtaaaactatc
gtgtttgaactgcagttagatgccttattacaaggcgctgtaccgcaagcaaaggccatt
tcgaagtatccggctaaccgccgagatatcgctgttgtggtcgatgaagccgttattgct
gaaaatatcctgtcaacgataaaaaaagttggcggaaatcagttggttggcttaaacttg
tttgacgtataccgaggcaagggtgttgagcctggcaagaagagtctggcgatagcactt
acgttacaagataacgctcgtacccttgaggaaaaagagattgcagcgactgttgagtcg
gtagtttcagtccttaagtccgagttcaacgcatcgttgagggattaa
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