Shewanella yunxiaonensis: KDN34_08210
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Entry
KDN34_08210 CDS
T07775
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
syk01002
]
KDN34_08210
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
KDN34_08210
Peptidases and inhibitors [BR:
syk01002
]
Cysteine peptidases
Family C82
KDN34_08210
Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KDN34_08210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QUN07368
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All DBs
Position
1780902..1782275
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AA seq
457 aa
AA seq
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MKEYWYWPLLLLCLITQNVRAGSSNEMALQTLTGQLQMLSLLPDQAALRLSLQQLQQTSS
SVVPSGQLSNAEQEIAAFWQQQGVSLPFASLPESATPLQRAIALEPQRQEYQLTLNRIQY
LLWLKNQPWPEIAPKGWLRPGDNHAVIPQIAQRLLWLGDLQEPQTNVYDYSEELAIAVKH
FQARHGLKVDAVIGPQTLRWLNVTPQQRATVLAQQFVSETIYRQQLPDSYILVNVPAYEL
SLVDAGKSVMQSKVIVGLPYRQTPLLQSRISSIVLNPGWHVPRSLLRKDVLPHIRKDGNY
LRDRDFLAYDAEGKVVSQTAAEWQQLARGPFPYRLVQQPGRHSALGRYKFHFDNSFDVYL
HDTPEKQLFSKAERAFSSGCVRVEKADELAQWLAQHRVKDQRTWRNMQQDYHTTQWFSLK
QPLAVYLVYWTAWVDAQGRAQFRDDIYHKFSSVEELR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatattggtactggcctttattgttgttatgcctgatcacacaaaatgttcgg
gccggcagtagtaatgaaatggcattgcaaaccttaactggtcagttgcagatgctttca
ctattgccagatcaagctgcattgcgacttagcttgcagcagttacagcagacatcgtca
tctgtggtgccctccggacaattatctaacgcggagcaagagattgccgctttttggcaa
cagcagggcgtcagcttaccgtttgcgtcgttgccggaaagtgcaactccgctgcagcgt
gcaatcgcattggagcctcaacgtcaagagtatcaactgacgctaaatcgcattcaatat
ctgttgtggttaaaaaatcaaccttggccagagatcgcacctaaaggatggttgcgtccc
ggtgataaccacgcggttattcctcagatagcacagcgcttactatggcttggtgatcta
caagaacctcaaaccaatgtgtatgactattcggaggaactggccatcgcagttaaacat
tttcaggcacgacatggtttaaaggtcgacgcggtaatcgggccacaaactctgcggtgg
ctgaatgttacgccgcaacaacgagcgacagtcctggcacaacaatttgtctcagagacc
atttatcgtcagcaattacccgatagctatattctggtcaatgttcctgcctatgagttg
tcgctggtggatgcgggaaaatccgtcatgcaatcaaaggtaatcgtcggcctaccttac
cgacagacaccgctgttgcaaagccgcatttccagcatagtgctgaatccgggttggcac
gtgcctcgtagcctgttgcgtaaagatgtattaccacatattcgtaaagatggtaattat
ctgcgtgacagagatttcctggcctatgatgctgagggcaaggtggtgagtcaaactgct
gccgagtggcaacaattagcgcgagggcctttcccttatcgattagttcagcaaccgggc
cgtcatagtgcgctgggccgctacaagttccattttgataacagttttgatgtttatctg
catgatacccctgaaaagcagctgttttccaaagcggaaagggctttttcatcgggttgt
gtccgggtagagaaagccgacgaattggcacagtggctagcgcagcaccgtgtgaaggac
caacgtacctggcgcaatatgcaacaggattatcacactacgcagtggttctcgctcaaa
caaccattggcggtatatcttgtctactggactgcttgggttgacgcacagggaagggcg
cagtttcgtgacgatatctaccacaaattttcctcagttgaagaattgagataa
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