Shewanella yunxiaonensis: KDN34_08325
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Entry
KDN34_08325 CDS
T07775
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
KDN34_08325
Enzymes [BR:
syk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KDN34_08325
Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KDN34_08325
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
QUN07388
LinkDB
All DBs
Position
complement(1818290..1820215)
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AA seq
641 aa
AA seq
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MFVIRCKRSLLTICVSVLLLLSSCLAVAADIDYSQQRQLYLDARDALKNNQTDTYQKLRK
QLSDYPLAIYLDFNANLDAILKMHGKEALRAIQPFASSPLYDMSRHRYLLQTANDQRWQD
FLIISPDLPRAPELQCYYYRAKLALGDKKQAYKGAEDLWLTGHSLPKSCDPLLRAWTHDG
FRTQELIWSRMLLSFDEAETGLLTFLSQKITRHKTQAQLLLDVYRDPRTLRHSRSFNGKA
PIYADIVAVGLKRLATKDLKQAFSLYEKYQKAGRFNDDDRHKLNRYLVWYALLKREDDLK
DNVDTMLPQLHSDDLTERRIRWALADQDIDTVKKLIPLLSDEARHDARWQYWQHRLGMLD
DVAYNKIADQRNFYGFAVASELGKPLNLAHDPTVNKDNLQARLADDPGLARIKELMAMDK
WLDAKPEWIMLLQRHNPQMQAQYGLYALQQGWEALAVDASISAKLWDDMTMRFPFPAKES
FNKAGKKFNTSVNELRAISRRESAYNTYATSGVGARGFMQLMPSTAELTAKKYQLPYQGV
KSLYQPEINIPLGSAYYSQLVKDFNGNRILATAAYNAGPYRVKQWLKDSQGKLDLMTFVE
VMPFKETREYVQAVFTYRAIYERKQQQTPPFFSNAEKQYRY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgatcaggtgcaaaaggagtttgctgacaatttgcgttagcgtactactgcta
ttgtcatcctgtttggctgttgctgctgatattgattattcacagcaacggcaactttat
ctggatgccagagacgcactcaaaaataatcaaacagacacctaccaaaagctgcgtaag
cagcttagcgactatccacttgctatctatctcgactttaatgcaaatctggatgcgatt
ttaaaaatgcatggcaaagaagccttgcgtgcaatccagccatttgccagttctccgttg
tatgacatgtcacgtcatcgctatctattgcagacagcaaacgaccaacgttggcaggat
tttttgattatttcaccagacctgccacgagcaccagagcttcaatgttattactaccgc
gcaaaattggcattgggcgataaaaagcaagcctacaaaggtgccgaggatctttggtta
accggccattcactgcctaaaagctgcgatccattactaagggcgtggacccatgacggg
tttcgtacccaagaactgatctggtcgcgcatgctgttgagtttcgacgaggctgaaacc
gggttgcttacctttctgtcgcagaagataactcgtcataaaacacaggctcagttgtta
ctggatgtctaccgcgatcctcgcacattacgtcatagccgctcgtttaacggtaaagcg
cccatttatgccgatatcgtcgccgttggcttgaaacgattggcaacgaaagatctcaaa
caagcattttcgttgtatgaaaaataccagaaagccggtcgattcaatgatgacgacagg
cacaaacttaaccgttatctggtgtggtatgcgctgcttaaacgagaagacgatctgaaa
gataacgtcgacactatgctgccacagttgcactcggatgatctgaccgaacggcgtatc
cgctgggcgcttgccgatcaggacattgacacggtcaaaaagctcataccgttacttagc
gatgaagcgcgccacgatgcgcgttggcaatattggcaacatcgtctcggcatgctggat
gatgtcgcttataacaaaattgccgaccagcgtaatttctatggttttgctgttgccagt
gagctggggaaaccgctcaacctggcccatgatcccaccgtcaataaagacaatctgcaa
gctcgtttagccgatgatcctgggcttgcacgaataaaagaattgatggcaatggataaa
tggctggatgccaagccagagtggatcatgttattacaacgtcataacccgcaaatgcag
gcgcaatatggtttgtatgcgttacaacaaggctgggaggcgcttgcagtagacgccagt
atttcggccaagctatgggatgacatgacgatgcgcttccccttcccggcaaaggaaagc
tttaataaagctggcaaaaaatttaatacttcggtaaatgaattgcgcgcaatctcacgc
cgagaaagtgcctataatacttatgcaacctctggcgtaggtgctcggggttttatgcag
ttgatgcccagtaccgcagagctcacagcaaagaaatatcaacttccttatcaaggcgtg
aaaagcttatatcagccggaaattaatattccgctgggtagtgcttattacagccagtta
gtcaaagattttaatggtaatcggatactcgctaccgccgcttataacgctgggccatac
cgggtaaagcaatggctaaaggatagccaaggtaaactcgatttaatgacatttgttgag
gtaatgccttttaaggaaacgcgagaatatgtgcaggcagtgtttacttatcgggctatt
tacgagaggaaacagcagcagacaccaccatttttcagcaatgctgaaaaacaatatcgt
tactga
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