Shewanella yunxiaonensis: KDN34_08705
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Entry
KDN34_08705 CDS
T07775
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syk03016
]
KDN34_08705 (ttcA)
Transfer RNA biogenesis [BR:
syk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
KDN34_08705 (ttcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
GSHPx
Motif
Other DBs
NCBI-ProteinID:
QUN07458
LinkDB
All DBs
Position
complement(1900911..1901858)
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AA seq
315 aa
AA seq
DB search
MVEIAELDKKQITRLNKLQKRLRREMGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDILL
NLQQRAPVKFEIVAVNLDQKQPGFPEDVLPAYLDSLNIPYHILEKDTYSIVKEKVPEGKT
TCSLCSRLRRGTLYGFAHRIGATKIALGHHRDDIIETLFLNMFYGGKLKAMPPKLLSDDG
ANVVIRPLAYSREKDIAEYAKLKQFPIIPCNLCGSQENLKRAEIKSMLKGWDKQFPGRIE
TIFTAMQNTAPSQGVDRNAFDFVSLKQDPHAEVSGEVADADLPAFDFMDVENRGHIDLDK
AAPHQRIEVVGIYTP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatagctgaactcgataaaaagcagatcactcgtctgaacaaattacaaaaa
cgtttgcgtagagaaatgggcagcgcaatcgccgattacaatatgattgaagaaggtgat
cgggtaatgtgttgcctgtctggtggtaaagacagttatgccatgctggatattctgctt
aacctacagcaacgtgcgccggtgaaatttgaaattgttgcggtgaatctggatcagaag
caacctggatttcctgaagatgtattgccagcctatttagacagtctgaatattccctac
catattttggaaaaggacacctattccattgttaaggaaaaggtccctgagggaaaaacc
acctgttcgttatgctcacgtttacgcagaggcacactctacggctttgcccatcgcatc
ggtgctaccaaaatagcgttgggtcaccatcgggatgacattattgaaacgctgtttctg
aatatgttttatggcggcaaattgaaagcaatgccacctaagttgttatctgatgatggc
gcaaatgtggtgatccgtccccttgcctattcccgtgaaaaagacattgccgaatacgct
aaacttaaacagtttcctatcattccttgtaatctctgtggctcccaggaaaatctcaaa
cgcgcagaaattaaaagtatgcttaaaggttgggacaaacaatttcctggtcgcatagaa
acgatcttcaccgctatgcaaaatacggcgccttcacaaggtgtagaccgaaacgcattt
gactttgtatcgctaaaacaggatccgcatgcagaggtgtcaggtgaggtagccgacgcg
gatttgccagcatttgattttatggatgtggaaaatcgtgggcatatcgatcttgataaa
gcagcgccacatcagcgaatcgaggtggtaggaatttacacgccatag
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