Shewanella yunxiaonensis: KDN34_08970
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Entry
KDN34_08970 CDS
T07775
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syk03032
]
KDN34_08970 (gyrA)
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_08970 (gyrA)
Enzymes [BR:
syk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KDN34_08970 (gyrA)
DNA replication proteins [BR:
syk03032
]
Prokaryotic type
DNA Topoisomerases
KDN34_08970 (gyrA)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDN34_08970 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QUN04423
UniProt:
A0ABX7YNU0
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All DBs
Position
complement(1954240..1956942)
Genome browser
AA seq
900 aa
AA seq
DB search
MTDQASSISPINIEDELRTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM
RYTEIRMQRLAHHLLADLDKETVDFVPNYDGTEQIPEVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIENPELPIEELIKCIPGPDFPTAAIINGRKGIEEAYRTGRGKV
IMRARADFETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALANGQPKLFNIKEMLEAFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIELIRNSPSPNEAKQRLTEQGWALGNVK
AMLEKAGDDAARPEWLEPQFGIHEDLYFLTEQQAQAILDLRLQKLTGLEHEKILQEYEEL
LETIAGLLHILHSSERLMEVIKEELQEVLTQFGDARRTEINESAADISLEDLINEEDVVV
TLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEQLLIANTHDTILCFSDFGKLYW
LKVYQLPLASRQSRGRPIVNLLPLEGDERITAILPVREYEEGKYIIMATSNGTVKKTALT
EYSRPRSNGIIAVNLKDGDQLIGVDITDGNSEIMLFSDAGKVVRFKEAEESSVTDEDGNP
ILDENGEVQITFKGVRPMGRTATGVRGIALEEGQKVVSLIVPRSDEAILTVTANGYGKRT
ALDEYPAKSRATKGVVSIKVTDRNGQVVGAVQASENDEIMLISDKGTLVRTPVSGVSLIG
RNTQGVTIIRTADDETVVGLQRIDEIQSEDDDSVDEADVDTLPDVPDADDDTTADEDITE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaggcttcatccatttcgccaattaatattgaagacgaactaagaacttcc
tacctcgattatgccatgagtgtaattgtaggccgggccttgccggacgtccgcgacggt
ttgaaaccggttcatcgccgtgtgctctttgcgatgaatgagttgaaaaacgactggaac
aaaccctataaaaagtccgcccgtgtggtcggtgacgttatcggtaagtatcaccctcat
ggtgatagtgctgtgtacgatactatcgtgcgtatggcgcaaccattttccctgcgttat
acactggttgatgggcaaggaaactttggttccattgatggtgatgctgcagcggcaatg
cgttatacagaaattcgcatgcagcgtctggcgcatcatctgctcgctgacctcgacaaa
gaaaccgtggattttgtacctaactacgacggtactgaacagatcccagaagtgttgcca
acccgtattcctaacctgctagtcaatggttcatctggtattgcggtgggtatggccact
aacattccgcctcacaacctgactgaagtcgtcaatggttgtctggcgttgattgaaaat
ccagaactgccaattgaagagttgatcaaatgtatccccggcccggacttcccaaccgct
gcgattattaatggtcgcaaaggtattgaagaggcttatcgtactggtcgtggcaaagtc
atcatgcgcgcacgggcagacttcgaaaccgaagacaatggccgtgagcgtatcatcgtc
actgaaatcccatatcaggtgaataaagctcgcctgattgaaaaaattgccgaactggtt
aaagacaagaaaattgaagggatcagtggcctgcgtgatgaatccgataaggacggtatg
cgtatcgtcatcgaaatcaaacgcggcgaagtgggtgaagtcgtactgaacaatctgtac
gcacagacccagatgcaatgttccttcggtattaatatggtggcgttggcaaatggccag
cctaagttatttaacatcaaggagatgctggaagccttcatcctgcatcgccgtgaagtc
gtcacccgtcgcaccgtatttgaactgcgtaaagctcgcgaacgcgcgcacattttagaa
gcgttagcggtcgcgctcgctaatattgatccgataattgagcttatccgaaattctcca
agtccaaacgaagccaaacaacgtcttaccgaacagggatgggcgttgggtaatgtgaag
gcaatgttggagaaagccggcgatgatgcggctcgtcctgaatggctggaaccgcagttt
ggtattcatgaagacctgtacttcctaacggaacaacaagcccaggccattttggatctg
cgcttgcagaaattgaccggtctggaacatgaaaagatcctgcaggagtatgaagagctg
ctggaaaccatcgctggactgctgcatattctccatagctctgaacggctgatggaagtc
atcaaagaagaactgcaagaagtgctgacccagttcggtgatgctcgtcgtacagaaatt
aatgagtctgctgcagatattagtctggaagatttgatcaacgaagaagatgtagtggtg
acactgtcacatctgggctatgccaagtatcagccgctaactgactaccaggctcagcgt
cgcggtggtaagggtaaggcggcaactaaagttaaagatgaagacttcgtcgaacagtta
ctgatcgccaatacccacgacactattttgtgtttctctgactttggtaagctgtattgg
ctgaaggtatatcaactgccactggcaagccgtcagtctcgtggtcgtccaattgtaaac
ctgctgccgttggaaggtgatgaacgcatcaccgctattctgccggtacgggaatatgaa
gagggcaaatatatcatcatggcgacttccaacggtaccgtgaagaaaactgcgctgacc
gaatacagtcgtccacgcagcaacggtattattgcggtaaatctgaaagatggcgaccaa
ctgattggcgtggatattaccgatggtaacagcgaaattatgttgttctccgacgccggt
aaagtggtgcgctttaaagaagctgaagaatcgtctgtaaccgatgaagatggcaatcca
atactggatgaaaatggcgaagtgcagattaccttcaaaggcgtacgacctatgggccgc
actgctactggtgtgcgtggtatcgcgttggaagaaggccaaaaagtcgtatcgctgatt
gtgcctcgtagcgatgaagccattcttaccgttactgccaatggatatggtaaacgtact
gcgctggatgaatatcctgccaagagccgcgccactaaaggggtagtctctattaaagtt
actgaccgtaatggtcaggtagtgggagcggttcaagcctcagaaaacgacgaaatcatg
ctgatcagtgataaaggcaccttggtgagaacaccggtttccggcgtatcactgattggc
cgtaacacgcagggcgtgaccattatccggacggctgatgatgaaacagtggtcggactg
caacgcattgacgaaattcaatcagaagacgatgatagcgttgatgaagctgatgtagat
acattgccagatgttccggacgcggatgatgataccaccgcggatgaagatattactgaa
taa
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