Shewanella yunxiaonensis: KDN34_09590
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Entry
KDN34_09590 CDS
T07775
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00061
Fatty acid biosynthesis
syk00071
Fatty acid degradation
syk01100
Metabolic pathways
syk01212
Fatty acid metabolism
syk02024
Quorum sensing
syk04146
Peroxisome
Module
syk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KDN34_09590 (fadD)
00071 Fatty acid degradation
KDN34_09590 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KDN34_09590 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDN34_09590 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
syk01004
]
KDN34_09590 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syk04147
]
KDN34_09590 (fadD)
Enzymes [BR:
syk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KDN34_09590 (fadD)
Lipid biosynthesis proteins [BR:
syk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KDN34_09590 (fadD)
Exosome [BR:
syk04147
]
Exosomal proteins
Exosomal proteins of breast milk
KDN34_09590 (fadD)
Exosomal proteins of breast cancer cells
KDN34_09590 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QUN04527
LinkDB
All DBs
Position
complement(2088144..2089817)
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINSLPADVPAEIDAGQFKSLLEMFETTVNRFADQSAFVNMGANLTFRKLEERSRA
FAAYLQNELKLKKGDKVAIMMPNLLQYPIAIFGILRAGLVVVNVNPLYTPRELKHQLVDS
EAKAIVVVSNFANTLEQVVAQTPVKHVIISGIGDLLGVPKRTLVNFVVKYIKHMVPKYSL
PGAISMRKALRVGKHQQYIKPVIESHDIAFLQYTGGTTGVSKGAMLSHGNVVANVLQANG
AYSPLLTDGIEKVVTALPLYHIFALTVNLFLFMHKGAQNLLITNPRDIPGFIAELKKFPF
TALTGVNTLFNALLNNAEFATLDFSRLKLSVGGGMAVQRAVAEKWQKLTKTKLLEGYGLT
EASPVVAGTPYNLEGYNGSIGLPMPSTQIEVRDSDGHPLPQGQAGELFAKGPQVMVGYWK
RPEETAKVIDKDGWLATGDIGYMDPQGFFYLVDRKKDMILVSGFNVFPNEVEEVVVMHPG
VLEVAAVGVSHPISGEQVKIFVVAKDKSLTKEALIQHCRQHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEAKSA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaccctggattaatagcttacccgctgacgtccctgcagagatagacgcaggt
cagtttaagtcattgctagagatgtttgaaacgacagtaaatcgatttgctgatcaatct
gcattcgtcaacatgggggctaatctgacattccgtaagcttgaggagcgcagccgcgcg
tttgctgcgtatttgcagaatgaactcaaattaaaaaaaggcgataaagtcgcgattatg
atgccgaacttgctgcaatatccaattgccatttttggcatattgcgggcgggtttggtg
gtggtcaacgttaatcctttatatacccccagagaattaaaacaccaattggtagacagc
gaagccaaagcgattgtggtggtgtctaattttgccaataccctagagcaagtggtagct
caaacaccggtaaagcacgtcatcatcagtggtatcggtgatttattgggcgtaccaaaa
cgtactttagtgaattttgtcgtgaagtatatcaagcatatggtccccaaatattcacta
cccggtgcgatatcgatgcgtaaagccttacgcgtggggaagcatcagcaatatataaag
ccggtgattgaaagtcatgatattgcatttctgcaatataccggggggacgacaggggtc
tctaaaggggcaatgctgagtcacggtaatgtggtcgccaacgtcttacaggctaacggc
gcttactcgccattattgactgatggcatagaaaaggtggttaccgcgttgccgctatat
catatattcgccctgacggttaacctgttcttgtttatgcataaaggggcacaaaaccta
ctgatcaccaacccgcgcgatattcctggctttattgccgagctgaaaaagtttccgttt
acagcactgacgggtgtgaacaccttgtttaatgcactgctgaacaacgctgaattcgcc
acattggatttttcacgattgaagctgagcgtcggcggcggtatggcggtacagcgcgca
gtggcagaaaagtggcagaaactgactaaaaccaaattgctggaaggatatggtctgacc
gaagcatcgccagtcgttgcaggtacgccttacaacctcgaaggctataacggatctatt
ggcttacccatgccatctacccagattgaagtgcgtgacagcgatggccacccgttgccg
caagggcaagccggtgagctttttgcgaagggaccacaggtgatggtgggctactggaag
cgtcctgaagaaacggccaaggttatcgataaggatggctggctcgcgaccggtgacatc
ggttatatggatcctcaaggctttttctatttggtagaccgtaagaaggacatgatcctg
gtttctggcttcaatgtgtttcccaatgaagttgaagaggtggtggtaatgcatcctggg
gttcttgaggttgcagcagtaggtgtctcacatcccataagtggcgaacaggtgaagatt
tttgtggtggcgaaagataagtcgcttactaaagaagcgttaattcaacattgtcgtcag
catttaacgggctataaggtgccgaaactggtagaattccgcgatgaattgccaaaaacc
aatgtgggaaaaatcctgcgcagggaactccgggacgaagcgaaaagcgcctga
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