Shewanella yunxiaonensis: KDN34_09855
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Entry
KDN34_09855 CDS
T07775
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syk03009
]
KDN34_09855
Enzymes [BR:
syk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
KDN34_09855
Ribosome biogenesis [BR:
syk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDN34_09855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
ExsD_M
Motif
Other DBs
NCBI-ProteinID:
QUN04576
LinkDB
All DBs
Position
2150335..2151021
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AA seq
228 aa
AA seq
DB search
MKPRDRRSPSSINSVRPTTSSASSKHHREIKAALSLEDTKVLLFNKPFDVLCQFTDEGGR
KTLKDFIDAPGVYAAGRLDRDSEGLLLLTNNGKLQAKLTAPQRHTFKTYWVQVEGDVSEI
ALEQLRQGVELKDGMTLPAQVRRIEPPVIWQRIPPIRERKSVADCWLEIKIREGRNRQVR
RMTAHVGYPTLRLIRYAIGNYSLDINGQRLANGTYLELTPQQIEALWQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccgtgaccgtcgttcgccgtcttctatcaatagtgtacgtccaactacctca
agcgcctcaagcaaacaccaccgagagattaaagcggcgctttcgctcgaggacaccaag
gttttattgttcaacaaaccgtttgacgtgttgtgccagtttaccgatgaaggtggtcgt
aaaaccttaaaagactttatagatgcaccgggcgtatatgctgccggaaggttagatcgc
gacagtgagggccttttgttactcaccaacaatggcaagttgcaagcaaaactgaccgca
ccgcaacgccataccttcaaaacctattgggtacaggttgaaggcgacgtgagtgaaata
gcactggaacaattacgccagggcgttgaattaaaagatggtatgacactgcccgcccaa
gttagaagaattgagccgccagtaatatggcaacgcataccgcctatacgcgaacgtaaa
tcagttgcagattgctggctggaaataaaaatccgcgaaggccgtaatcgccaggttcgc
cgcatgactgcgcatgttggttaccctacgctacggctaatccgctacgccattggcaat
tactcgctcgatatcaatggtcaacgcctggcaaacggaacttatctggaattgacacca
cagcagattgaggcactttggcaatga
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