Shewanella yunxiaonensis: KDN34_10365
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Entry
KDN34_10365 CDS
T07775
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_10365
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDN34_10365
Archaeal homologous recombinant proteins
KDN34_10365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
APG6_N
OmpH
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QUN04661
LinkDB
All DBs
Position
complement(2264485..2267559)
Genome browser
AA seq
1024 aa
AA seq
DB search
MKPLTLEMSAFGPFADTQHIDFSGLGDNPLFLINGPTGAGKTSILDAICFALYGKTTGNE
REGSQMRCDYADDELLTQVIFSFELGHRRYRIRRVPEQQRAKSRGDGFTLQKSEAELLRI
HEDGKEELLVANKVTDATAMVEDLTGLDVDQFRQVMVLPQGKFRELLLADSKEREKIFSQ
LFQTHIYSRIEERLKQQALDIKAKARDMQQRRQGILDTAGVESIEALQQTLCELAAPLAL
AEQAKLQAVAAKEQALKALEAAKTLAKEFDARQKLQLQADAFTAQEPQQLRLQQQLQLAR
RAEKLQPAKHQLQQWQLELTQAQQALVNAEQQQLQAKAVLQQAVTAQAKLPLLETQKQQL
QLQLQQYQQLQPLLNNLGAQHQQLKQLERQIQAAVASEQQQRQLLQQQQQQKTAFNAEIV
KLSAVASKMAALQQQQYALSRQLEQRQQLDQLNQQQQQLQHALNVAEAQGKLARDKKQQA
ETEYKQLQLAWHQGQAAILAKELTADQPCPVCGSRQHPQPAHSQQSLPTSEQLDQAQMQW
ELARTEYDNIRSEYKSLRDRLQPLTEQITLQQQQLEGKADQNVAVTKTMLDNIGIALQQA
QQATEQLEVRRGELETLELNMQQSQQQLELWQLQSAELQRNASNIHGILSEQQRQLPQEF
QQLDAVTAEAKLTQVLSDIAGQLTVAAQQIDLIQQHFQQASIAATQADSEANSRMERLNA
AKVHQQQAETEFLQQLQAAGFNDNTALEHATLASAAMAQLEQQLRDWEKQRDQLIGKLEA
LQQKLQESAVPDLPTLEQRLTNAQRHWQQAESAWQQLHTQMANLQRAADKLQQEAQASRL
LEQQYAVVGTLADVANGNNQGKLSLQRFVLSVLLDDVLLEASERLALMSKGRYRLLRKED
RAKGNKASGLELEVEDAYSSRVRPVATLSGGESFMAALALALGLSDVVQAYAGGIRLDTL
FIDEGFGSLDQDSLELAIRTLIDLQSTGRMIGVISHVSEMKEQITTRIDIAKQVRGSHIR
VVTP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctgacgctggagatgagtgcttttgggccatttgccgatactcagcacatt
gatttttcaggtttgggtgataacccactgtttctgatcaatgggccaacgggcgcaggc
aagaccagcattcttgatgccatctgctttgcgctctatggcaaaacaactggcaatgag
cgcgaaggcagccagatgcggtgcgattatgctgatgatgaattgctcacccaggtcatt
tttagttttgagctgggacaccggcgttaccgcattcggcgagtaccggaacaacaacgc
gctaaaagtcgcggtgatgggttcaccctgcaaaaaagtgaagctgaacttttacggatc
catgaggatggcaaagaggaattactcgtcgccaataaggtaaccgatgccaccgccatg
gtggaggatctcactggactcgatgtcgatcagtttcgccaggtgatggtattgccgcaa
gggaaattccgggaactactgctggctgattctaaagagcgggaaaaaatattcagtcag
ctatttcagacacacatctatagtcgtattgaagagcggttgaagcaacaagcgttggac
atcaaagccaaggcgcgtgatatgcagcagcggcgacaaggcattttggacaccgcaggt
gtcgagtctattgaagcattacagcaaaccctctgtgaactggcggcaccgctggcgctg
gcggaacaggccaagctacaagctgtcgcagcgaaggaacaagcactaaaggcattggaa
gccgcgaaaacattggcaaaagaattcgatgcacggcaaaagctgcaactgcaagctgat
gcctttaccgcgcaagagccgcagcaactgcgtctgcagcaacaattgcagttggcccga
cgcgctgaaaaactgcagccagccaaacatcaactgcaacaatggcaactggagctgact
caggcacagcaggcattagtcaacgctgagcaacaacaattacaagcaaaagccgtgttg
cagcaggcggtaaccgctcaggctaagctgccgcttctggagactcagaaacagcaacta
caactgcaattgcaacaatatcaacagttacagccattattaaataaccttggcgcacag
catcagcagttaaaacagttggaacgccagatccaggcggctgtagcttctgagcaacag
cagcgacaactgctgcaacaacaacagcaacagaaaaccgcttttaatgccgagatcgtt
aagctgtcggcggttgcttctaaaatggcggcattgcaacaacaacagtatgcgctgagt
cggcaactggaacagcgccagcaactggatcagctgaaccaacaacagcaacagttgcaa
catgcgttaaatgtcgccgaggcgcaagggaagctggctcgggacaagaagcaacaggcg
gaaaccgaatataagcagttgcaattagcctggcatcaaggtcaggccgctattctagcc
aaagaattgaccgctgatcagccttgcccggtctgtggcagtcggcagcatccacaaccg
gcgcacagtcagcagtcgttgcccacaagcgaacagttggaccaggcgcagatgcaatgg
gagttggctcgtacggaatatgacaatatccgcagtgagtacaaaagtctgcgggatcgc
ctgcagccgttgactgaacagataaccctgcagcagcaacagctcgaaggtaaggccgac
cagaatgttgcggtgaccaagaccatgctggataacatcggtatcgcactgcaacaagcg
cagcaggcgaccgaacaactggaagttcggcgaggtgaactggaaacgttggagctcaac
atgcagcagtcgcagcagcaactggaactgtggcagctgcaatcggcagaacttcaacgt
aacgccagtaatattcacggtattctcagcgaacagcaacgccagttaccccaggagttc
caacaactggatgctgtgacggcggaagcgaaactgacccaagttctcagcgatattgcc
gggcagttaaccgtagcggcgcaacaaatagatttgatccaacagcactttcaacaagcc
agcattgcggcaacacaggccgatagtgaggccaacagcagaatggagcggcttaatgca
gcgaaagtccatcagcaacaggctgaaacggaattcctgcagcagttacaggccgcaggc
tttaacgataatacggcgttggaacatgccacattagccagtgctgcgatggcgcagttg
gaacaacaattgcgcgactgggaaaaacagcgagatcaactcatcggtaaattagaggcg
ttacagcagaagcttcaggagagcgccgtaccggatctgccgacattggagcaacggtta
actaatgctcagcgtcattggcaacaagcagagtccgcttggcaacagttacacacgcag
atggccaatctccagcgcgccgcagacaagttacaacaggaagcgcaagcatcacgactc
ctggaacagcaatatgctgtggttggtaccttagccgatgtggctaacggcaataatcag
ggcaaactcagcctgcaacggtttgtgctgagtgtcttgctcgacgatgtgctgctagaa
gcgagcgaacgactggcgttgatgagcaaaggccgttatcgcttgctacgtaaagaagat
cgggcaaaaggcaacaaggcgtcagggctggaactggaagtggaagatgcgtacagttct
cgagtgcgacctgtggcaacccttagcggcggcgagagttttatggcggcactggcatta
gcgctcggactgtcggatgtcgtacaggcttatgcgggcgggattcgtcttgatacctta
tttatcgacgaagggtttggaagtttggatcaggattcattggaactggcaattcgcaca
ctaatcgatctgcaatccaccggtcgtatgatcggtgttatttcacatgtatctgaaatg
aaagagcagataacgacgcgtatcgatatcgccaaacaggtgagaggcagtcatatcagg
gttgtgacaccttga
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