Shewanella yunxiaonensis: KDN34_10560
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Entry
KDN34_10560 CDS
T07775
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDN34_10560 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_10560 (ung)
Enzymes [BR:
syk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KDN34_10560 (ung)
DNA repair and recombination proteins [BR:
syk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDN34_10560 (ung)
Prokaryotic type
KDN34_10560 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QUN04697
LinkDB
All DBs
Position
2303719..2304387
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AA seq
222 aa
AA seq
DB search
MTQTPTWADVLGPEKTKDYFVSTLKFIDAERAHHKCIYPPQEDTFNALRYTPLADVKVVI
LGQDPYHGPGQAHGLCFSVKAGITPPPSLQNMFQELCHTVPGFSYPQSGDLTPWARQGVL
LLNTVLSVEEGKAHSHAHLGWEQFTDRIVEAVDRYQHGVAFLLWGRHAGDKAQRVNPRKH
LVLKAAHPSPLSASRGFFGCNHFNLANQYLQSQGKVPISWQL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaccccgacttgggccgacgttctgggcccagaaaaaacgaaagattacttt
gtcagtacgcttaaatttattgatgctgaacgcgctcaccacaaatgcatttatcctccc
caagaagatacattcaatgcattacgctacacgccattggcggatgtcaaagtggttatt
ctgggacaagatccttaccatggacctggacaagctcatggtctgtgtttttcagtgaaa
gcaggtatcacaccgccaccttcgctgcaaaacatgtttcaggagctttgccacaccgta
cctggcttcagttatcctcagagcggtgatcttacgccgtgggcccgacaaggcgtttta
ctgctcaatacggtgctgagtgtcgaagagggaaaagcacactcacatgcgcatttggga
tgggaacagtttaccgataggattgttgaagcagtcgaccgctaccagcacggtgtcgca
tttttgttatggggacgccatgccggtgacaaggcacaacgcgttaaccctcgtaagcat
ttggttcttaaagcagcacacccatcgcctttatctgctagcagaggctttttcggctgt
aaccattttaatctggcaaaccagtatttgcagtctcagggaaaagtccccatcagctgg
caactttaa
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