Shewanella yunxiaonensis: KDN34_11560
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Entry
KDN34_11560 CDS
T07775
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00540
Lipopolysaccharide biosynthesis
syk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KDN34_11560 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syk01005
]
KDN34_11560 (lpxB)
Enzymes [BR:
syk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
KDN34_11560 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
syk01005
]
Lipid A
KDN34_11560 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
QUN04872
LinkDB
All DBs
Position
complement(2537093..2538244)
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AA seq
383 aa
AA seq
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MTQHSQRIFAMVAGEVSGDILGAALVAALKQRYPDARFIGIGGPRMEALGFESLFAMEEL
AVMGLVEVLAHLPRLLKLRKALVQQLCALQPDCFIGIDAPDFNLGVELQLKQHGITTVHY
VSPSVWAWRPKRIFKIAKATNMVLSLLPFEKAFYDRYQVPCTFVGHTLADTIPLHSDKQQ
ARIELGLDAEAEYLAILPGSRGGELKMLAQPFIEAAMLIKQRFPDIRFVTPLVNAHRREQ
FTAALKQYAPDLEIHLVDGHSREVMAAADCILLASGTATLEAMLVKRPMVVAYRVSPVTY
QLAKWLVNIRTFSLPNLLAGKNLVPELIQQDCTPEKIADAIAVQLNQDPRPLMAAFSRLH
EQLRQNASERAADAVVALLPEHN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacactcgcaacggatttttgcaatggtcgccggagaagtctccggcgatatt
ttaggtgcagctttagtcgcagcacttaagcagcgataccccgatgcccgttttattggt
atcggtggccctcgtatggaggcgttggggttcgaatccttattcgccatggaagagctg
gcggtcatggggctggtcgaagtgcttgcccatctgccgcgactattgaaattgcgcaaa
gctttagtccagcagctatgcgctctccaacccgactgttttatcggcattgatgcacca
gattttaacttgggcgttgaactacagcttaaacaacatgggataacaactgttcactac
gtcagtccatcagtgtgggcctggcgtcctaaacggatcttcaaaattgccaaagcgacc
aatatggtgctgtcgttattgccatttgaaaaagcgttttatgatcgctatcaggtgccc
tgtacctttgtcgggcatacgctggcagacacgattccgttgcatagtgacaagcaacag
gcgcgcattgaattggggttggatgcggaggctgaatatctggcgatcctccccggttct
cgtggtggcgagttaaagatgctggcgcaaccttttattgaggctgcgatgctgatcaaa
cagcggttccctgatattcggtttgtaacaccgttagtcaacgcccatcgtcgcgaacag
tttaccgcggcgttaaagcaatatgcgccagatctggagattcatctggttgatggtcat
tcccgagaggtgatggcggcggcggattgcattttgttagcttctggtactgctacgttg
gaagctatgctggtaaaaaggccgatggtcgttgcatatcgggtgagtccggttacttat
caattagccaaatggttggtaaacatccgcaccttctcattgcccaatttgctggcgggc
aaaaatttggttcccgaactgatccagcaagactgcacaccagaaaagattgccgatgcg
attgcggtgcagctaaatcaggatccccgaccgctgatggcagcgttttctcgcttacat
gaacaactccggcaaaatgctagtgagcgtgcggcggatgccgtggtggcactattaccg
gagcataactga
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