Shewanella yunxiaonensis: KDN34_11975
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Entry
KDN34_11975 CDS
T07775
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syk03000
]
KDN34_11975 (nhaR)
Transcription factors [BR:
syk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KDN34_11975 (nhaR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_29
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QUN04948
UniProt:
A0ABX7YQA1
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All DBs
Position
complement(2619804..2620712)
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AA seq
302 aa
AA seq
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MSHLNYNHLYYFWMVQKKGSVTKAAETLCLTPQTVTGQIRAFEERLNGSLFKRNGRRLEP
TELGELVFRYADRMFALSYEMLDVLNYTKENSLLFEVGIADALSKTLASRVLMSVIPRDA
SMQLACYEATHEHLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVAFFSAMPLTQ
PFPACLEEAPILLPSKRSSIGQQLYRWFDEKNLNVTILGEFDDAAMMKAFGYFGRGIFVA
PSIYQQDILNHNVRLLGATLDIKEEYHVMFAERMIQHPAVKCLLETDFEVLFAGYDVQLQ
KL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatctgaattacaaccatctttactatttttggatggtacaaaaaaaaggctcg
gtgaccaaagcggctgagaccttgtgtcttacaccgcagaccgtcaccggacagatccgc
gcgtttgaagagcggctcaacggcagtctgtttaaacgtaatgggcgtcgattggaaccc
actgaattaggggagttggtgtttcgttatgcggatcgcatgttcgcgctctcatacgaa
atgttggatgtgctcaactacaccaaagagaacagtttactgtttgaggtcggtattgct
gacgcactgtcgaaaacactcgctagtcgagtgttaatgtctgtgatcccgcgcgatgcg
agtatgcagttagcgtgctacgaagccactcatgaacatctgatggcgcggttacgcgag
cataaactcgatatgatcctctccgattgcgccggggagtcgttaaaatatcctgaaatt
ctctcgaaaaaattgggtgaatgtggtgtggcctttttttcggcgatgccactgactcaa
ccgtttcctgcctgtttggaggaagcacctattctgttacccagtaaacgctcgtccatt
ggccaacagttatatcgctggtttgatgagaaaaatctgaatgtcaccatcctcggagaa
tttgacgacgccgcgatgatgaaggcttttgggtactttggccgcggaatttttgtggca
ccctccatctatcaacaggacattctcaaccacaatgtgcggctcttgggggcaacgctg
gatattaaggaagaatatcacgtgatgtttgcagaacggatgatccagcatccagcggtc
aagtgtctgcttgagactgatttcgaagtgctttttgctggctatgatgttcaacttcag
aaactttag
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