Shewanella yunxiaonensis: KDN34_12220
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Entry
KDN34_12220 CDS
T07775
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_12220 (dinB)
Enzymes [BR:
syk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDN34_12220 (dinB)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
KDN34_12220 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
RecR_HhH
HHH
DNA_pol_lambd_f
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QUN04990
LinkDB
All DBs
Position
complement(2672177..2673247)
Genome browser
AA seq
356 aa
AA seq
DB search
MKKIIHVDMDCYYAAVEMRDFPEYRGKPLAVGGSRERRGVISTCNYEARKFGIHSAMATG
YALKLCPALILLPGRMEVYKAVSRQIHTIFERYTDKIEPLSLDEAYLDVSDCQLHQSSAT
LIAEAIRRDILAETGLTASAGVAPVKFLAKVASEINKPNGQYVITPESLPDFIAALPLEK
IPGVGKVTASRLAEMQLFTCADVQRIPQHQLVEIFGKFGQVLHQRAFGIDARELNPNRIR
KSIGVETTLARDIYSAEQCRQVMQHLLKELAGRFQRHAREQQIGKLVVKLKFADFRQTTI
ESRAAELSPQLFDNLLTQAWLRANGRGIRLVGIAAGLSAAVTKEPNANERQLTLNI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatcattcatgtggatatggactgttattatgcagctgtagaaatgcgtgat
tttccagaatatcggggaaagccgctggccgttggtggtagtcgtgagcgcagaggtgtt
atcagtacctgtaactatgaagcgcgcaaatttggtattcattcagcgatggctaccggt
tatgcgctaaagctgtgtcccgcactcatcttgcttcctggccgaatggaagtttataaa
gccgtgtctcggcagatccatactattttcgaacgctacaccgataagattgagccattg
tctctggatgaagcgtatttggatgtgtcggattgtcagctgcatcaaagttctgccacc
ttgattgccgaagctattcgtcgcgatattctggctgaaaccggactcactgcttctgct
ggtgttgccccggtaaaatttctggctaaagtggcgtcggaaattaacaaacctaacggg
caatatgtgattactccggagtcattgcctgactttattgcggcgctgcctttagagaaa
attcccggggttggtaaagttaccgcgagtcgtttagcagagatgcagctatttacctgt
gccgatgtgcaacgtataccgcagcatcagttggtcgagatatttggcaagtttggtcaa
gtgttgcaccaacgcgcatttggtattgatgcgcgggagctcaatcctaatcgcatacgc
aaatcgataggtgttgaaacaacattagcccgcgatatttatagcgctgaacagtgtcga
caagtaatgcagcatttactgaaagagctggctggcagatttcagcgacatgcgcgtgag
cagcagattggcaaattggtggtaaagctgaagtttgcggattttcgccagacgactatc
gaaagccgtgcggcagaattatcgccacaactgtttgataacttgttaacgcaagcgtgg
ctgcgagcaaatggtcgagggatcaggttagtcggcatcgctgcggggttaagtgcggca
gttaccaaagaacccaatgcgaatgaacgtcagctgacactgaatatctga
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