Shewanella yunxiaonensis: KDN34_12615
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Entry
KDN34_12615 CDS
T07775
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
KDN34_12615
Enzymes [BR:
syk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KDN34_12615
Peptidoglycan biosynthesis and degradation proteins [BR:
syk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KDN34_12615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QUN05052
LinkDB
All DBs
Position
2743511..2744329
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AA seq
272 aa
AA seq
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MRRSNGWLVLGLLLLLGGCASEPVNRNDGRYSMKDDRPPENPPDLSQVKDAQPRYEPYSK
QGNKDYEVLGQSYSVMPSGKGFVQEGLASWYASKFHGHYTSNGELYDMYTMSAAHKTLPL
PSYVRVTNLDNNKSVIVRVNDRGPFHSNRVIDVSYAAAYKLGMLQTGTARVRLEVIYNDS
PEHQAVAAITSGKAVYYVQIVAASSKEKLQSLASELEQKFNIQSRVTAADNLYRLQLGPM
ANEDLANRMLDTIRNGGYPQSYLVRDPASQGG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaagtaatgggtggttagtactaggccttttattattgttaggtggctgtgcc
agcgagcccgtcaatcgcaatgacggtcgctacagcatgaaggatgaccggccacccgaa
aatccgccggatttgtcgcaagtaaaggatgcccagccacgttacgaaccctatagtaaa
cagggcaacaaagactatgaagtgttgggacagtcttattcagtgatgccttccggcaaa
ggatttgtgcaggagggtttggcctcctggtatgcgtccaaatttcacggacattacacg
tcaaacggtgaactttatgacatgtacaccatgtcggctgcacataagacactgcccttg
cccagttacgtcagagtcacgaatctggacaataacaaaagcgtgattgtgcgcgtcaat
gaccgtgggccattccactccaatcgggtaatcgacgtgtcctatgccgctgcctataaa
ctcggaatgctgcaaaccggcaccgcgcgagtgcgcttggaagttatctataatgacagc
ccagaacaccaagctgtcgcagccattaccagtggcaaagcggtttactatgtacagatt
gttgccgccagttctaaggaaaagctgcaatcattagcttcggaattggaacagaaattt
aatatacaaagccgtgttactgccgcagataacctgtaccgtttgcagttaggccccatg
gccaatgaggatctggctaaccgtatgttggacactatccgtaatggtggttatccacaa
agttacctggtaagggatcccgcctcacaaggtggttaa
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