Shewanella yunxiaonensis: KDN34_13380
Help
Entry
KDN34_13380 CDS
T07775
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00260
Glycine, serine and threonine metabolism
syk00630
Glyoxylate and dicarboxylate metabolism
syk00670
One carbon pool by folate
syk00785
Lipoic acid metabolism
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01200
Carbon metabolism
Module
syk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KDN34_13380 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KDN34_13380 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KDN34_13380 (gcvP)
00670 One carbon pool by folate
KDN34_13380 (gcvP)
Enzymes [BR:
syk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KDN34_13380 (gcvP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QUN05185
LinkDB
All DBs
Position
complement(2911515..2914403)
Genome browser
AA seq
962 aa
AA seq
DB search
MTKQTLTQLEQHDLFIRRHIGSDETQQQQMLDYVGAESLDDLTAQIVPGSIRLNRELALD
DSCGEATGTESIKQIAAKNKVFKSYIGMGYYGTEVPAVIQRNVLENPGWYTAYTPYQPEI
AQGRLEAILNFQQLSMDLTGLDLASASLLDEATAAAEAMAMAKRVSKAKKANIFYVADDV
FPQTIDVVKTRAECFGFEVLVGPADEAVNHEIFGALFQYSNKQGAIRDYTELFAKLHEQK
AVVTVAADIMSLVLLKSPGSMGADIAFGNTQRFGVPMGYGGPHAAYFVTKDEHKRSMPGR
IIGVSKDTRGNVALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVYHGPDGLKTI
ANRIHRLTDILAAGLKAKGVSLLNNTWFDTLTFRVADKEAVVARALAAQSNLRIDADGAL
GVSLDETTTRADVATLFDIILGAAHGLDITALDAAIVAAGSNSIPAALLSDDAILSHPVF
NRYHSETEMMRYIKHLENKDLALNHSMISLGSCTMKLNAAVEMQPISWPEFANLHPFCPQ
DQAEGYHELVQNLSDWLVEITGYDAVCMQPNSGAQGEYAGLLAIRRYHQSRGDAHRNVCL
IPQSAHGTNPASAHMAGMQVVVVECDKLGNVDMDDLRAKASDMAANLSCIMITYPSTHGV
YEETIRDICDVIHQHGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFVAGHSVVKLGKASDNNGAVAAAQYGSAGILPISWMYIKLLGAKGLR
LSTQNAMLNANYLAKKLSEHYPVLYRGRNDRVAHECIIDLRPLKEASGVTEMDIAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKVELDRFINAMVAIRSEIAKVEAGDWPADNNPLHN
APHTLADIMDPAFDERPYSRELAVFPCDAVRANKFWPTVNRIDDVYGDRNLFCACVPMSE
YL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaaccctcactcagctagagcagcacgatctctttatccgccgccatatt
ggctccgatgagacccagcaacagcagatgctggattatgtcggtgccgaatctctggac
gatttgaccgcgcagatagttccggggtcgattcgtctgaatcgggaactggcacttgat
gactcctgtggcgaagccaccgggactgagtccatcaagcagattgccgccaagaacaaa
gttttcaaaagttatatcggaatgggctattacggtactgaggtaccggcagttatccag
cgcaatgtgctggagaatcccggctggtacaccgcttacacgccttatcagcctgaaatt
gcccagggtcgtctggaagctatccttaacttccagcaactgtcgatggatttaaccggc
ctggatctggcatcagcctctctgctggatgaagccaccgccgctgccgaagccatggca
atggctaaacgtgtgtccaaagccaaaaaagccaatatcttctatgtggcggatgatgta
tttccacagactatcgacgtggtgaaaacccgtgccgaatgttttggttttgaagtgctg
gtcggcccggctgatgaagccgtcaaccacgaaatttttggtgcactgtttcagtacagc
aacaaacagggtgctattcgtgattacaccgagctgtttgccaaactgcacgaacagaaa
gccgtcgttaccgtcgctgccgacattatgtcgctggtactgctgaagtctcctggcagc
atgggcgcagatattgcctttggtaacacccaacgctttggtgtaccgatgggttatggt
ggtccacacgccgcgtattttgtcactaaagacgaacacaaacgctctatgcctggccgt
atcatcggcgtatccaaagatactcgtggcaatgtagcattgcgtatggcgatgcagacc
cgtgaacagcatattcgccgtgaaaaagccaattccaatatctgtactgcacagatcctg
ctggcgaacatggcatctttttacgctgtgtaccatggtccggatggcttgaaaaccatc
gctaaccgtattcaccgtctgaccgatattctggctgccggattgaaagcgaaaggcgta
tcactgctgaacaacacctggttcgataccctgactttccgcgtggctgacaaagaggcg
gttgtggctcgggcgctggcggcacaaagcaacctgcgtatcgacgctgatggtgcactg
ggtgtgagcctagatgaaacgaccactcgcgccgatgtcgctacactgtttgatatcatc
ctcggtgcggctcatgggctggatatcaccgcactagatgccgcaattgtggcagctggc
agcaactcgattcctgcggcactgctgagtgatgatgccatcctcagtcacccggtgttt
aatcgctatcacagcgaaaccgagatgatgcgttatatcaagcacctggaaaacaaagat
ctggcgttgaaccattcgatgatttcccttggttcttgcaccatgaagctcaacgccgca
gtggaaatgcaaccgatcagctggccggaatttgctaacctgcatccattctgcccgcag
gatcaggccgagggttatcatgaactggtccagaatctgagtgactggctggtagaaatc
accgggtatgatgcggtatgtatgcagccaaactcgggtgcccaaggcgaatacgcaggt
ctgctggcaattcgccgctatcaccaatctcgtggcgatgcacaccggaacgtgtgtctg
atcccacagtcggctcatggtaccaaccccgcatccgcccacatggcgggcatgcaggtc
gtggtcgtggaatgtgacaaattgggtaacgtggatatggatgatctgcgcgccaaagcc
agtgatatggcagcgaatctgtcctgcatcatgatcacttacccatcgactcacggtgtg
tatgaagaaactattcgcgatatctgcgatgtcatccatcagcacggtggtcaggtgtac
ctcgacggtgccaatatgaacgcacaggtggggattacctcacccggatttattggcgct
gacgtgtcacacctcaacctgcataaaacctttgctatcccgcatggcggtggtggtcca
ggtatgggccctatcggtgtcaaagcacatctggcaccgttcgtcgctggtcacagcgta
gtgaaattgggtaaagccagtgacaacaacggggccgttgcggccgctcaatacggtagc
gctggcatcctgcccatcagctggatgtacatcaaactgttgggtgctaaaggactgcgg
ttatccacgcagaatgccatgctgaacgctaactatctggcgaagaagctgtctgaacat
tatccagtgctgtaccgtggccgtaatgatcgcgtggcacacgaatgtatcatcgatctg
cgtcctctcaaggaagcttccggtgtgactgaaatggatattgccaaacgtctgaatgac
tatggtttccatgcgccgaccatgagcttcccggtagctggcaccctgatgatcgagccg
actgagtccgaatcaaaagtggaactggatcgctttatcaatgctatggtggctatccgt
agcgaaatcgccaaagtggaagccggtgactggccagcggataataacccgctgcacaac
gctccgcacaccctggccgatatcatggacccagcctttgatgaacggccttacagccgt
gagctggcagtgttcccatgtgacgccgtgcgtgccaacaagttctggcctaccgttaat
cgtattgatgacgtgtatggcgaccgtaatctgttctgcgcttgtgttcctatgtctgag
tacctgtaa
DBGET
integrated database retrieval system
