Shewanella yunxiaonensis: KDN34_14690
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Entry
KDN34_14690 CDS
T07775
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00020
Citrate cycle (TCA cycle)
syk00620
Pyruvate metabolism
syk00720
Other carbon fixation pathways
syk01100
Metabolic pathways
syk01120
Microbial metabolism in diverse environments
syk01200
Carbon metabolism
syk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KDN34_14690
00620 Pyruvate metabolism
KDN34_14690
09102 Energy metabolism
00720 Other carbon fixation pathways
KDN34_14690
Enzymes [BR:
syk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
KDN34_14690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
RimK
ATP-grasp_3
DUF1611_N
ATP-grasp_5
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QUN05424
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All DBs
Position
complement(3207093..3208508)
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AA seq
471 aa
AA seq
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MIKKILIANRGEIAVRIIRACAEMGIRSVAVYSDADRHALHVKRADEAYSLGDDPLAGYL
SPQRLVSLAVEAGCDALHPGYGFLSENPQLAELCAEHGVKFIGPDAEIIRRMGDKTEARR
TMMAAGVPCTPGTEGNLKDLAEALQEAERIGYPVMLKATSGGGGRGIRRCNSSEELTQQF
PRVISEATKAFGSAEVFLEKCIINPKHIEAQILADSLGNTVHLFERDCSIQRRNQKLIEI
APSTQLTPEQRAYIGKMAVRAAQAVNYENAGTVEFLLSGDEIYFMEMNTRVQVEHTITEQ
ITGIDIVREQIRIASGLPLSVKQEDIRHRGFALQFRINAEDPKNNFFPSFGRITRYYAPG
GPGVRTDTAIYTGYVIPPYYDSMCLKLVVWALNWEDALDRSLRALDDMRVQGVKTTAPYY
SQILRNPEFRTGQFNTSFVEEHPELMDYSEKRRPEQLALAIAAAIAANAGL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaaaaatcctaattgccaaccggggtgaaattgccgtgcgcatcatccgggct
tgtgcagaaatgggtatccgttcggtggccgtgtattccgatgctgatcgtcatgcgttg
catgtgaagcgtgctgatgaagcgtatagtttgggcgacgatcctttagcaggttatctg
agtccgcaacgtctggtgagtttggcagtggaagcgggctgtgacgcattacatcccggt
tatggttttctgtctgaaaatccgcaactggcagagttgtgtgctgaacatggtgttaag
tttatcggtccagatgcagaaattatccggcgtatgggcgataaaactgaggcacgtcgt
accatgatggcggcgggtgtcccctgcacacctggtactgaaggtaacctgaaagatctc
gcagaagctttgcaagaagcagaacgcatcgggtatccggtgatgttaaaagccacttct
ggtggcggtggacgtgggatccgccgctgtaacagtagtgaagaactcacgcagcagttt
ccgcgcgtgatttctgaagcgactaaagcctttggttccgctgaagtatttctggaaaag
tgcattatcaaccctaagcatattgaagcgcagatcctggcagatagcttaggcaatacc
gtgcacctgtttgagcgtgactgttcaattcagcgccggaaccagaagttgatcgaaatt
gcgcccagtactcagctgacaccggaacaacgcgcttatatcggaaaaatggcggtacgt
gcggcgcaggcagtgaactacgagaacgcaggtaccgtagaatttctgctgtccggtgat
gaaatctactttatggagatgaacactcgggtacaggtggagcacaccattactgagcag
atcactggtattgatattgtgcgcgagcagatccgcattgcgtctggcttgccactgtca
gtgaagcaggaagatatccgccatcgcggctttgcgctgcagttccgtattaacgcggaa
gatcccaaaaataattttttcccatccttcggtcgtattacccgttactacgcaccgggc
ggccctggtgtgcgcactgatactgcgatttataccggttatgtcattccaccgtattac
gactctatgtgtctgaaattggtggtgtgggcgcttaactgggaagacgcactggaccgc
agcttgcgggcgctggatgacatgcgggtgcaaggggtgaaaaccaccgcgccttactat
tcgcagatcctacgtaatccggaattccgcactggtcaatttaataccagttttgtggag
gagcatccggaactgatggattactcagaaaaacgtcgtccggaacaactggcgttagca
attgcggcagcgattgcagcgaatgccggcttataa
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