Shewanella yunxiaonensis: KDN34_14780
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Entry
KDN34_14780 CDS
T07775
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDN34_14780 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syk03019
]
KDN34_14780 (groL)
03110 Chaperones and folding catalysts [BR:
syk03110
]
KDN34_14780 (groL)
03029 Mitochondrial biogenesis [BR:
syk03029
]
KDN34_14780 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syk04147
]
KDN34_14780 (groL)
Enzymes [BR:
syk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KDN34_14780 (groL)
Messenger RNA biogenesis [BR:
syk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KDN34_14780 (groL)
Chaperones and folding catalysts [BR:
syk03110
]
Heat shock proteins
HSP60 / Chaperonin
KDN34_14780 (groL)
Mitochondrial biogenesis [BR:
syk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KDN34_14780 (groL)
Exosome [BR:
syk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KDN34_14780 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KDN34_14780 (groL)
Exosomal proteins of breast cancer cells
KDN34_14780 (groL)
Exosomal proteins of colorectal cancer cells
KDN34_14780 (groL)
Exosomal proteins of bladder cancer cells
KDN34_14780 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2868
Motif
Other DBs
NCBI-ProteinID:
QUN05441
LinkDB
All DBs
Position
complement(3236086..3237726)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKALSQSCSDSKSIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDSPYILLVDKKISNIRELLPVLEGL
AKSGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVLTKDNTTIIDGNGEEAQIKARVVQIKQQIEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAASKIHDVEVANEDQKHGVVIALRAMEAPLRQIAANAGEEASVVANKVKDGNGNFGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVGELPKEEAAPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttaaatttggcaatgatgcccgcgtaaaaatgctggcgggtgta
aacgttctggctaacgcagtcaaagtaacactgggcccgaaaggtcgtaacgtcgttctg
gataagagcttcggcgcaccgctgatcaccaaagacggtgtgtcagttgctaaagagatc
gaactggaagacaagttcgaaaacatgggcgctcagatggtgaaggaagttgcttccaaa
gccaacgatgctgcgggtgacggtaccactactgccactgtactggctcaggctatcgtt
aacgaaggtctgaaagctgtggctgcgggtatgaacccaatggacctgaaacgtggtatc
gacaaagcggttgttgccgctgttgaagaactgaaagccctgtctcagtcatgctcagac
tctaagtctatcgctcaggtaggtactatctctgctaactctgacgaatctatcggtcag
atcatcgccactgcgatggaaaaagttggtaaagaaggtgttatcaccgttgaagaaggt
caggcactggaaaacgaactggatgtggtagaagggatgcagtttgaccgtggttacctg
tctccatacttcatcaacaaaccagaaactggcagcgtagagctggacagcccatacatc
ctgctggttgacaagaaaatctccaacatccgtgaactgctgccagtgctggaaggcttg
gctaagtcaggtaaaccactgctgattgtggctgaagatgttgaaggcgaagctctggcg
acactggttgtaaacaacatgcgcggtatcgtgaaagtggctgctgtgaaggctcctggt
ttcggtgaccgtcgtaaagccatgctacaggatatcgctatcctgactggcggtactgtt
atcgctgaagaaatcggtctggaactggaaaaagccactctggaagacctgggtactgct
aagcgcgttgtgctgaccaaagacaacaccaccatcatcgatggtaacggtgaagaagct
cagatcaaagcccgcgtggtacagatcaaacagcaaatcgaagaatctacttctgattac
gacaaagaaaaactgcaagaacgcatggctaaactggccggtggtgtcgcagtgatcaaa
gttggtgctgctactgaagtagaaatgaaagagaagaaagcacgcgtggaagacgcgctg
cacgctactcgcgccgcagttgaagaaggtgtggttgctggtggtggtgttgctctggta
cgcgcagcttctaaaatccacgatgttgaagtagctaacgaagatcagaaacacggtgtg
gttatcgcgctgcgcgcaatggaagctccactgcgtcagatcgctgccaacgctggtgaa
gaagcctcagtagttgccaacaaagtgaaagacggcaacggtaacttcggttacaacgct
ggtaacgacacttacggcgatatgctggaaatgggtattctggacccaaccaaagtgacc
cgttctgcactgcagttcgctgcttccgttgctggcctgatgatcaccaccgaagctatg
gtcggtgagctgccaaaggaagaagccgctcctgatatgggtggcatgggcggtatgggt
ggcatgggggggatgatgtaa
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