Shewanella yunxiaonensis: KDN34_15070
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Entry
KDN34_15070 CDS
T07775
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
syk
Shewanella yunxiaonensis
Pathway
syk03030
DNA replication
syk03430
Mismatch repair
syk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDN34_15070 (ssb)
03430 Mismatch repair
KDN34_15070 (ssb)
03440 Homologous recombination
KDN34_15070 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syk03032
]
KDN34_15070 (ssb)
03400 DNA repair and recombination proteins [BR:
syk03400
]
KDN34_15070 (ssb)
03029 Mitochondrial biogenesis [BR:
syk03029
]
KDN34_15070 (ssb)
DNA replication proteins [BR:
syk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KDN34_15070 (ssb)
DNA repair and recombination proteins [BR:
syk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KDN34_15070 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
KDN34_15070 (ssb)
Mitochondrial biogenesis [BR:
syk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
KDN34_15070 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Pyridox_ox_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QUN05494
LinkDB
All DBs
Position
complement(3303347..3303994)
Genome browser
AA seq
215 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSDTWKDQQGQQQERTEWHRVVIF
GKLAEVAGEYLRKGSQVYLEGRLQTRKWKDQSGQERYTTEIVVDMQGSMQMLGGRPQNQG
GAPMQGGNMGGGNFGAPQGGNQYAAPQQQPQQQYAPQQAAPAYQPQQNSGYAPNKPQSQQ
RPAPQPQQKPQQQPQQPQQNYTPDLDDGWDDDIPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaataaggtaattctggtgggcaatctggggcaggacccagag
gtgcgctatatgccaaacggcaatgctgtggcaaatatcaccgtcgcgaccagtgatacc
tggaaggatcagcagggacaacagcaggaacgcaccgagtggcaccgtgtggtaattttc
ggcaagctggctgaagtggcaggtgaatatctgcgcaaaggttctcaggtttatctggaa
ggccgtttgcagacccgtaagtggaaagatcagagtggtcaggagcgttataccactgag
atcgtggtcgatatgcaaggcagcatgcagatgctcggtggtcgcccacagaatcagggt
ggcgcaccaatgcagggtggcaacatgggcggtggtaattttggtgcacctcagggtggc
aaccagtacgctgcaccacaacagcaaccacagcagcaatatgcaccgcagcaggctgcg
ccagcttatcagccacagcaaaatagtggttatgcgcctaataagccgcagtcacagcag
cgcccagcgccgcagccgcagcagaaaccacaacagcaaccgcagcagccacaacagaac
tacactccagatctggatgatggctgggatgatgatatcccgttctga
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integrated database retrieval system
