Shewanella yunxiaonensis: KDN34_16610
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Entry
KDN34_16610 CDS
T07775
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syk03021
]
KDN34_16610 (rpoH)
Transcription machinery [BR:
syk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDN34_16610 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
2Fe-2S_thioredx
UCR_14kD
Fe_dep_repress
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QUN05774
LinkDB
All DBs
Position
complement(3633157..3634014)
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AA seq
285 aa
AA seq
DB search
MTDQTQSMALMVPQGSSSLEAYIHSVNSMSMLDAEQEYALAKRLQETGDLQAAKQLIMSH
LRFVVHIARGYAGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKQRLGWFSDEEVSMVADSLGVSKADVTEMESRMSA
QDAAFDMSSDSDDDHDFAPALYLEDHSSDVAEQVENDNWEARSQARLLAAIKTLDERSQH
ILKARWLDDDKTTLQDLADQYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaaacgcaatcaatggcactgatggtccctcagggcagcagtagcctcgaa
gcctatattcattcagtaaacagcatgtcaatgctggacgctgaacaagagtatgcgctg
gctaagcgtttgcaggaaacaggtgacctgcaggcggctaagcagcttattatgtcgcac
ctgcgttttgtggtgcatattgcacgtggttatgccggctatggcctgccacaggcagat
ttgattcaggaaggcaacattggtctgatgaaagcggtaaaacgcttcgaccccgacgtc
ggtgtgcgtctggtttcctttgccgtgcactggatcaaagctgaaattcacgaatatgta
ttgaaaaactggcgtatcgttaaagtcgccaccaccaaagctcagcgtaaactgttcttt
aacctgcgtaaggctaagcaacgtcttggctggttcagtgatgaagaagtttctatggtt
gctgatagcttgggtgtctccaaagcggatgtcactgaaatggaatcacgcatgtcagcg
caggatgctgcgtttgatatgagcagtgatagcgatgatgaccatgattttgccccagcg
ttatatctggaagaccactcttctgatgtcgcagaacaggtggaaaatgataactgggaa
gctcgttctcaggcgcgactgctggcagcaattaaaacgctggatgaacgtagtcagcat
attttgaaagcgcgctggttggatgacgataaaaccactctgcaagatttggcggatcag
tatcaggtctcagcagaacgtattcgtcaattggaaaagaacgccatgaacaaacttaag
gcgtgtatggaagcttaa
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