Shewanella yunxiaonensis: KDN34_16885
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Entry
KDN34_16885 CDS
T07775
Name
(GenBank) mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
syk
Shewanella yunxiaonensis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_16885
Transporters [BR:
syk02000
]
Other transporters
Pores ion channels [TC:
1
]
KDN34_16885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QUN05823
LinkDB
All DBs
Position
complement(3691294..3692565)
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AA seq
423 aa
AA seq
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MEKDIRVVLSDWLARLGVNSEPSGWLATSILILSSLLVAAIVYIIIRRGVVQAMNLMIVH
SKATWDDIFLKHRVLEKLSLLAPAIVLNSLVPLVLTEHRLASGLIDKLLSIWLVVVMVRA
LYAAMDAINEVADVKLISRRLPIKSFVQLFKLFLFFVALIVSISVLADQSPIYFLSGLGV
ATGLVMLVFKDTILGFVAGIQLAANRMVSPGDWIQMDKYGADGAVEEVSLITVKVRNWDK
TITMIPAYALVSDAFRNWRGMSESGGRRIKRALNIDINSIRFLTEADRKQLAKINYLKEY
LPKKISELGQSNAKVSDMDMPVNGRRLTNVGTFRAYLVEYLKHHDKVHQDMTLMVRQLAP
TTEGLPLELYIFTNDTRWVNYEEIQSDIFDHIFAILPQFDLRAFQAPTGNDIRSLRGVPL
ADK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagatattcgtgttgtgttgtcggactggttggcgcggctaggtgttaacagt
gaaccttcgggttggctggcaacatcaattctgatcctgagcagtctgttggtcgcggct
atcgtttatatcatcatccgtcgcggggtggtacaagcgatgaatctgatgattgtgcac
tccaaagccacctgggatgatatctttttgaagcaccgggtgttggagaagttgtcattg
ctcgctccggcaatagtgctcaattctttagtgccgctggtgctgacagaacatcggttg
gccagcggtctcatcgacaagctgttgagtatctggctggtggtggtgatggtccgggcg
ttgtatgcggcgatggatgccatcaatgaagtcgcagatgtcaaactgatcagtcggcgc
ctgcctatcaaaagctttgtgcagttgtttaaactgttcctgtttttcgtcgcgttgatt
gtcagtatttcggtgctggcagatcagtcacctatttatttcctcagcggcttgggtgtc
gccaccggtttagtgatgttggtattcaaggatactatcttagggtttgtggcggggatc
cagctggcggctaaccgaatggtcagtccaggggactggatccagatggataagtatggc
gcagatggtgctgtagaagaggtatcgctcatcaccgttaaagtgcgtaactgggataaa
accatcaccatgatcccggcttatgcattggtttcggatgcgtttcgtaactggcgtggc
atgtcggaatcgggtggccgacgcatcaaacgtgcgttgaatattgatatcaattccatc
cgctttctgacggaggcagaccgcaagcaactggcgaaaatcaactatctgaaagaatac
ttgccgaaaaaaatcagtgagctcgggcaatccaacgccaaggtatcggatatggatatg
ccggttaatggccgccggctgaccaatgtcggcacttttcgcgcctatctggtggagtat
ctgaaacaccatgacaaggtgcatcaggatatgaccctgatggtgcggcagttggcacca
acgacagaaggattaccgctggaactctatatcttcactaatgatacccgctgggtaaat
tatgaagagatccaatccgatatctttgaccatatctttgccattttaccgcaatttgat
ctgcgggcatttcaggcgccaaccggtaatgatatccgtagtctgcggggtgtgccgctg
gcagacaaataa
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