Shewanella yunxiaonensis: KDN34_17050
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Entry
KDN34_17050 CDS
T07775
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00061
Fatty acid biosynthesis
syk00071
Fatty acid degradation
syk01100
Metabolic pathways
syk01212
Fatty acid metabolism
syk02024
Quorum sensing
syk04146
Peroxisome
Module
syk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KDN34_17050
00071 Fatty acid degradation
KDN34_17050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KDN34_17050
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDN34_17050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
syk01004
]
KDN34_17050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syk04147
]
KDN34_17050
Enzymes [BR:
syk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KDN34_17050
Lipid biosynthesis proteins [BR:
syk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KDN34_17050
Exosome [BR:
syk04147
]
Exosomal proteins
Exosomal proteins of breast milk
KDN34_17050
Exosomal proteins of breast cancer cells
KDN34_17050
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
IHO1
Motif
Other DBs
NCBI-ProteinID:
QUN05853
UniProt:
A0ABX7YSS5
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All DBs
Position
complement(3725020..3726810)
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AA seq
596 aa
AA seq
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MSLEQYQIIKLLDQQVQEQQDKIALEGFETAAPWDKVSWNQFKNITDQLAAALIDSGLEV
QDRVAILSNNCPQWTCIDIATIKARGVLVPIYPTSTLEQAAYIIRDAGAKVLCVADDEQY
HLACKLQQLCPTLQQLIVFNNDVELKSFSHFHLDKMISEEAGQPHPELEQRLAQSQLDDL
MTLIYTSGTTGDPKGVMLDQRNIASAMRQHHQRVPFNRGDVSLVFLPLSHVYERGWSFYV
MSRGGRNVYLSDTHRVKEALTAVKPHTVCVVPRFLEKVYSAVQDKLSKAPASKRQLFAWA
MAVGQRQFEASQGRAKGSLWLKLQWLLASRLVYGKLHQALGGNIKYMPCGGAALDPHVSA
FFAAINVPLLVGYGMTETTATVACCSPDNRVPGANGKPLDEVEVRLGDDNEILVRGDTVM
RGYFNRPQETAEVLKDGWLKTGDVGQLDANGNLFITDRLKELMKTSNGKYIAPQRVEGKV
GCCPFIEQVAIVADARNYVTALIVPAFEALEAWAKQKGLSYESPVELIRHSQVLAHFDER
LKQLQQGLAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYANEINAMYGH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgagcagtatcagattatcaagttgcttgaccagcaggtacaggagcaacag
gataagatcgccttggaaggctttgaaacagcagccccatgggataaagtcagttggaat
caattcaaaaatatcactgatcaattggcggcagcactgattgacagtggtctggaagtg
caggaccgtgtggctattttgtctaacaactgtccacagtggacctgtattgatatcgcc
accatcaaagcgcgtggggtattggtacccatttatcccacctctaccttagaacaagcg
gcttatattattcgcgacgccggggccaaggttttgtgtgtggccgacgatgagcaatat
cacctcgcctgcaagttgcagcagctgtgtcctaccttgcaacagctgattgtgttcaac
aacgacgttgagctgaagtccttcagtcatttccatctggacaagatgatcagcgaagaa
gctggtcaaccacatcctgagttggaacagcgcttggcccagagtcagctggatgatttg
atgacgctgatctacacctcagggacgaccggcgatcccaaaggcgtaatgctggatcag
cgtaatattgcctcggcaatgcgtcagcaccaccagcgggtgccgtttaatcgtggtgat
gtgtcactggtatttttgccattaagccatgtctatgagcgcggttggagcttttatgtg
atgagccgcggtgggcgcaatgtctatctgtccgatacacatcgcgttaaagaagcattg
accgccgtcaagccgcataccgtttgtgtggtgccaagattccttgaaaaagtttacagc
gcggtacaggacaaactttctaaggcgccagcatcaaaacggcaattatttgcgtgggcg
atggcggtgggtcagcgccagtttgaggcttctcaagggcgagctaaaggcagtttatgg
ttgaaactgcagtggttactggcgagccgcttggtatatggcaaactgcatcaggcattg
ggtggcaatattaaatatatgccgtgtggtggcgcagcgctggatccgcatgtcagtgcc
ttctttgcggccattaatgttccgttgctcgtgggctacggcatgaccgaaaccacggct
actgttgcttgctgtagtccggataaccgggtccctggcgccaatggtaagccgctggat
gaagtggaagtgcggttgggcgatgacaacgaaatcctggtgcgtggtgataccgtgatg
cgcgggtatttcaatcggccacaggaaaccgctgaagtactgaaagacggttggctgaaa
accggcgatgtcgggcaattggatgctaatggtaatctgtttattaccgatcgtcttaaa
gagctgatgaagacctctaacggcaaatatattgcgccgcagcgggtcgagggcaaagtc
ggctgttgtcctttcattgaacaggtggcgattgttgccgatgcccgtaattacgtaaca
gcgttgattgtcccggcgtttgaagcgctggaagcctgggctaaacagaaaggacttagc
tatgagtctcccgtggaattgatccgtcattcccaggtattggcgcactttgatgagcgc
ctgaaacagttgcagcaagggctggctggatttgagcagattaaaaagttcactctgtta
ccagaggccttttctatggaagccgggctgattacgccaacactgaaactgcgtcgtaaa
atgatctaccataaatatgctaatgagattaatgccatgtatggccattaa
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