Picosynechococcus sp. PCC 7003: AWQ21_03005
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Entry
AWQ21_03005 CDS
T05991
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
syl
Picosynechococcus sp. PCC 7003
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syl03016
]
AWQ21_03005
Enzymes [BR:
syl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AWQ21_03005
Transfer RNA biogenesis [BR:
syl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AWQ21_03005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ANV83435
UniProt:
A0A1B1TM47
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Position
633843..635855
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AA seq
670 aa
AA seq
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MEKGQLIEFRLQGERVLAVAERPEGKKDWIVIDGRGQSHKLRPQRVEYTVAGSPYDPTEI
PSFSTESQALVDPDNLAVAWEFLVEASEQATPESLAQLLFSTKTPQQCYACHLMLAEDKI
FFKRKGDYYEPRSEAQVREIQHQLEVEAQKEREKTEFLQRVNQAIAGETVTWEDSDRQRF
ESLERFVLYPEQSAKAAHDLLEMLGRSPTTEQAFRLLVSLGWWSSHENLALLRSGYPRKF
SQKVLDVSHVRLSASPGDTDEGNRIDLTHLKTYTIDDESTSEIDDGLSIETLENGLHKVW
IHIADPTRLLSPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSLRQGQVCAALSFG
VLLTDNGAIADYEITPSWVKPTYRLTYDDVDEMLHLRIQAESEIALLADFAHKRRKWRDA
QGSISIKMPEASIKVQDENVFIEVLHASMSRELVAEMMILAGEVAGHYGRTHCLPLPFRG
QPQPELPPQEELLLLPAGPVRACAVRRCMPRSEMGTNPVRHASLGLDSYIQVTSPIRRYT
DLLAHFQIKAHLRGDELPFSVDELKEILYSVVTSSQEAVHVERQTNRYWSLEYLRRNADQ
VWQGLVLRWLREDEKLGIILLEELGLELPHRFERAVALGDRLEVKVSQADPHKDEIRFRE
LLETEIAAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggacaactgatcgagtttcggctacagggagaacgagtacttgctgtcgct
gagcgtcctgaaggaaaaaaagattggatcgtaatcgatggacgggggcaatcccataag
ctgcgtccccaaagggttgaatataccgtggcgggttccccctacgatccaaccgagatc
cccagcttttccacagaaagtcaggcattagttgatcccgataacctcgccgtcgcctgg
gaatttctcgtcgaagcctcggaacaggcaaccccagaatccctcgcgcaacttttgttt
tcgacgaaaacgccccagcaatgttatgcctgtcacctaatgctggcggaagacaagatt
ttctttaaacgcaaaggggactactacgagccccgttcagaggcgcaagttcgagagatt
caacatcagctagaagttgaagcccaaaaagagcgcgaaaaaacagaatttttacagcgg
gttaaccaggcgatcgccggggaaacagtaacctgggaagacagcgatcggcaacgtttc
gaaagcctagaaagatttgtcctctacccagaacaatcggccaaagccgcccacgacctc
ctcgagatgctggggcgatcgcccacaaccgaacaggcattccgcctcttagtttccctt
gggtggtggagttcccacgaaaatcttgctctcctccggagcggttaccccagaaaattt
tctcagaaggtactcgatgtgtcccatgtccgcctgtcagcctcacccggtgataccgat
gaggggaaccgtatcgatttaacccatctcaaaacctacaccattgacgatgagagcacc
tcggaaattgacgatggcctcagtattgaaactttagaaaatggcctgcataaagtttgg
atccacatcgctgatcccacacgcttactaagccctggggatgaacttgatctagaagcc
cgccgtcgcagtaccagcctctatttacccacggggatgatctccatgttcccggaagag
ttggcgacggggcccatgagcttgcgccaaggacaggtctgtgctgctctcagttttggg
gttttgctcacagataatggggcgatcgccgattatgaaattacccccagttgggtgaag
cccacctaccgcctgacctatgacgacgtggacgaaatgctccatctgcggatccaggcc
gaatcagaaattgccctcctcgcggattttgcccacaaacgccgaaagtggcgggatgcc
caaggctccattagcatcaagatgcccgaagcctccattaaggtgcaggatgaaaacgtt
ttcatcgaagtcctccatgcctcgatgtcccgggaactggttgcggaaatgatgatcctt
gccggcgaagtggcaggtcattatggccgcacccattgtttacctttgcctttccgggga
caaccccagccggaactccccccccaagaagaacttttgttattacccgccgggcctgtg
cgcgcctgtgccgtacggcgttgtatgccccgcagtgaaatggggacaaatcctgtgcgc
catgccagtttgggattagattcctatatccaagtcacatcgcccattcgtcgttatacg
gatctattagcccatttccaaattaaggcccatctgcggggggatgaactgcctttctca
gtagatgaactcaaggaaattctctacagcgttgtcacttctagtcaggaagctgtccat
gtggagcgccaaaccaaccgctattggagcctcgaatatttacgtcgtaatgcggatcaa
gtgtggcagggtttagttctgcgctggctccgggaagatgaaaagttaggcattattctc
ctggaagagctgggcctagagcttccccatcgctttgaacgggccgttgccctaggcgat
cgcctggaagtaaaagtaagccaggccgatccccacaaagatgaaattcgcttccgggaa
ctgctcgaaacggagattgcggcggcctcctag
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