Picosynechococcus sp. PCC 7003: AWQ21_03225
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Entry
AWQ21_03225 CDS
T05991
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
syl
Picosynechococcus sp. PCC 7003
Pathway
syl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWQ21_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syl03019
]
AWQ21_03225
03009 Ribosome biogenesis [BR:
syl03009
]
AWQ21_03225
Enzymes [BR:
syl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWQ21_03225
Messenger RNA biogenesis [BR:
syl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWQ21_03225
Ribosome biogenesis [BR:
syl03009
]
Prokaryotic type
rRNA helicases
AWQ21_03225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Phasin
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANV83476
UniProt:
A0A1B1TM73
LinkDB
All DBs
Position
complement(683630..685099)
Genome browser
AA seq
489 aa
AA seq
DB search
MTTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLP
FLEKIDLEQKTVQGLILTPTRELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQR
GVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSMGFIDDVKKILRQSPKTRQTV
CFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
DPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKEGKIKMIVATD
IAARGLDVENLSHVINFDLPDNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERR
VKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASFLPIVKRLGDEYDPQAIAAAV
LQMMYDTNSPEWLNEDWEVPEVSTTTGLPKPTKKGGRSSGRRSSNYKGGGGGYKGDRSRG
RRSYSSNRS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcttttcaaaccatcggcttatccgacgctcgcgttgacctgttagaaaat
atcggcttcgaaaagcccaccgagattcaaagtaaagcgatccccgcaatccttgaagga
cgggacgtagtcgggctttcccaaacaggtacgggtaaaaccgccgcctactctctgcct
ttcctcgaaaaaatcgacctagaacaaaagactgtccagggcttgatcctcacgcccacc
cgtgaactggcagtgcaggtgacccagtccctcaaggaattcgccgtagaccgtcgtctc
tgggtgctcaccgtctgtggtggccaatccatggaacggcaaattcgcagcttgcaaaga
ggcgtccacattgttgtggggactccgggccgagtgatcgatctcctcgaacggggtaag
ttgtcctttgaggaactccgttgggcagtgctcgacgaagccgatgaaatgctcagcatg
ggtttcattgatgatgtgaaaaagattttgcgtcagtccccgaaaactcgccaaacggtt
tgtttctcggcgaccatgccccccgcaatccgggatctcgtggaaaatttcctcaatgat
ccgatcaacatcacgatcaaacagccccaggtaacccccgaccgcattgcccaagaggtc
tatatgattccgcgtggttggtcaaaaaccaaggcgctactgccaatcttggaaatggca
gacccggaatcggcgatcatctttgtgcgcaccaaacgcacggcttcggagttgaccaac
gagttggttgaagcaggccaaagtgccgatgaataccacggtgacctcaaccaaaaccaa
cgggaaaaactggtacgtcgctttaaggaaggcaagatcaagatgattgtcgccacggat
attgcggcccggggtcttgacgtggaaaacctcagccacgtcatcaactttgatttgccg
gataatacggaaagttacatccaccggatcggtcggacaggccgggctgggaaaacgggt
accgcgatcgcccttgttgaacccagcgatcgccgtctgttgcgtcaaattgaacggcgc
gtcaaacagtccctcaaggtttcaacgattcccagtcggactgaagtggaagcccaacgg
gtaacccgcctggaaacccaggtacgggaagctttagctggcgaacgcatggcttctttc
ttaccgattgtgaagcgtttgggtgatgagtatgatccccaggcgatcgccgcggcggta
ctgcagatgatgtacgacaccaattcccctgaatggctcaatgaagattgggaagtgcca
gaagtcagcacgacgactggtttacccaagcccacgaaaaaaggtggccgcagcagcgga
cgtcgctcttctaactacaaagggggtggcggtggctacaaaggcgatcgctcccgggga
cgccgttcctacagttccaaccgctcctag
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