KEGG   Picosynechococcus sp. PCC 7003: AWQ21_08950
Entry
AWQ21_08950       CDS       T05991                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
syl  Picosynechococcus sp. PCC 7003
Brite
KEGG Orthology (KO) [BR:syl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:syl03021]
    AWQ21_08950
Transcription machinery [BR:syl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AWQ21_08950
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_Tnp_ISL3 HTH_23 HTH_24 HTH_17 HTH_3 Sigma70_ECF HTH_28 Phage_CI_repr HTH_Crp_2 HTH_8 KORA MarR_2 LacI Xre-like-HTH HTH_AsnC-type DUF134 HTH_30
Other DBs
NCBI-ProteinID: ANV85612
UniProt: A0A1B1TT95
LinkDB
Position
complement(1879929..1880699)
AA seq 256 aa
MTTKVSDNIKSKTLELLQEYRQSQDVKIRNQIVSLNIGLVRKEAHHWSRQCSENFDDLMQ
VGSLGLLRAIERFTLERGNAFSSFANPYIRGEIQHYLRDKSSTVRIPRRMLQLRQQSNRF
IQAFRQEHNRQPSIAEIAEHLDISVSEWQSINLAYQNRDPVSLDVSVKADQGENTSLGDL
VPDPGYKSFQLAIEDQIRIQQGLAQLEEHTRKVLEFVFLHDLTQKEAADLLGVSVITVSR
RIKKGINSLKKIIGSD
NT seq 771 nt   +upstreamnt  +downstreamnt
atgacgacgaaagtcagtgacaatattaagtccaaaaccctggaactgttacaggaatat
cggcagtcccaagatgtcaaaattcgcaatcaaattgtgagtttaaatattggtttagtt
cgtaaagaagcccatcattggtcgagacaatgtagcgagaactttgatgatctcatgcaa
gtgggcagtttaggtttgctccgagccattgagcgatttaccctagagcgcggtaatgcc
tttagttcctttgcaaacccctatattcgaggtgaaattcaacattacctgcgcgataaa
agttccactgttcgtattccccgtcggatgctccaattacggcaacaatctaatcgattt
atccaagcctttcgccaagaacataatcgacaaccttccatcgcagaaattgccgaacat
ctcgatatttccgtgagcgagtggcagtcaattaatcttgcttaccaaaatcgtgatccc
gttagtcttgacgtttctgtaaaagctgatcaaggggaaaacacttctctaggggatctt
gttccggatccgggttacaaaagctttcaactggccattgaagatcaaattcgcattcaa
cagggccttgctcaactcgaagaacatactcgcaaggtattggaatttgtttttctccat
gatctcacccaaaaagaggccgctgacttactgggagtgagtgtcattaccgtttcacga
cggattaaaaaaggcattaattccctcaagaaaatcattggtagtgactag

DBGET integrated database retrieval system