Picosynechococcus sp. PCC 7003: AWQ21_09075
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Entry
AWQ21_09075 CDS
T05991
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
syl
Picosynechococcus sp. PCC 7003
Pathway
syl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWQ21_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syl03019
]
AWQ21_09075
03400 DNA repair and recombination proteins [BR:
syl03400
]
AWQ21_09075
Enzymes [BR:
syl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWQ21_09075
Messenger RNA biogenesis [BR:
syl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWQ21_09075
DNA repair and recombination proteins [BR:
syl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWQ21_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
HTH_24
ResIII
HTH_5
GerE
Helicase_Sgs1
HTH_7
HTH_IclR
MarR
MarR_2
DUF6115
HTH_20
HTH_69
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ANV84521
UniProt:
A0A1B1TQD2
LinkDB
All DBs
Position
1903965..1906103
Genome browser
AA seq
712 aa
AA seq
DB search
MSQFPSLEAALKHFFGYDNFRHGQKAVITAALQNRDVLALMPTGAGKSLCFQLPALLKPG
LTVVISPLIALMQDQVDALTDNGIGATFLNSTLNLDQARSRIQAIFNGNIKLLYVAPERL
FNEGFQQLLTDVDQTIGLAGFVVDEAHCVSEWGHDFRPEYRQLSRIRRRYPQTPCYAFTA
TATQRVREDIIDQLALQNPSFHCTSFNRPNLYYEVLPKDRKSYTQLLRYVRQRRGQPGII
YCSSRKKVDELADRLKQDGVKALPYHAGLADRLRADYQAQFIRDDVPVMVATVAFGMGIN
KPDVRFVVHYDLPTNLERYYQESGRAGRDGEAAHCTLFYRAGDIKKAEYFIELKEDEQEK
RIAYQQLQKMIDYAEGIDCRRTIQLSYFGEQFPGDCGGCDNCQNPRPVEDWTIEAQKFLS
CVARCRERYGMTYIIDVLRGSKKEKIIQNGHHQLSTYGIGLDHTKEEWKNLGRSLLHQGL
VAETSDGYRVLKLNGHSWEVLRKQREVKIAVERRQTAPELLGISESRLDAEILFGQLRQL
RKQLADANWVAPYMVFSDATLRQMAKRRPRTQADFCLISGVTSAKYQRYGEPFLAAIQEF
CASQGPPKPQIHSTQLLTLQLYQQGLSVTEIAKQRNLTAGTINEHLATLLQSGEITDLDR
LVKPEAQVEIEKAIATVGPESLTQLREHLQEKYSYDAIKLVRAKLLKTAQSA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcccatccctagaagccgccctcaaacacttcttcggatatgacaatttc
cgccatggccaaaaagctgtcattaccgccgccctgcaaaaccgtgatgtcctggctctg
atgccaacgggggccggaaaatccctttgttttcaactgcctgctctgctgaaaccggga
ttaacggtggtgatttctcctttaattgccctgatgcaggatcaagtggatgccctgacg
gataacggcatcggggcgacatttctaaacagtaccctcaacctcgaccaagcgcgatcg
cggatccaggcaatttttaacggcaacattaaacttctctacgttgccccagaacggcta
tttaacgaaggctttcagcaactactgacggatgtggatcagaccattggcctcgctggc
tttgtggtggatgaggcccactgtgtttcagaatggggccatgattttcgtcccgaatac
cgccaactcagtcgcatccggaggcgttatccccagactccctgctatgcctttaccgcc
actgctactcaacgtgtccgtgaagatattattgaccagctcgcgttacaaaaccccagc
tttcactgcaccagctttaatcgtcccaacctttactatgaagttctccccaaagaccgg
aagagttatacgcaactgctgcgctatgttcgacaacggcgcgggcaaccaggcattatc
tactgttcgagtcgcaaaaaagtagacgagttggccgatcgcctcaaacaagatggcgtt
aaagcattgccctaccatgcgggactagctgatcgtttacgggctgactaccaagcgcaa
tttatccgggatgatgtgcctgtgatggtcgccaccgttgcctttggcatgggcattaat
aaacccgatgtgcgctttgtggtgcattatgatttgccgactaatttagaacgctattac
caggagtcggggcgcgcaggccgggatggggaagccgcccactgtactctgttttatcgg
gcgggagatattaaaaaggcagagtattttattgagctcaaggaagacgaacaagaaaaa
cggatcgcctaccaacaactccagaaaatgattgactatgccgaagggatcgattgtcgg
cggacgattcaactgagctatttcggggagcaatttccgggggactgtggcggctgtgac
aattgccagaatccgcgtccggtcgaagattggaccattgaggcccagaagtttttatcc
tgtgttgcccgctgtcgagaacgctatggcatgacctacattatcgatgtgttgcggggt
tcaaaaaaagaaaaaattattcagaacggacaccatcaactatccacctatggcattggc
ctcgaccacaccaaggaagaatggaaaaatctggggcgatcgcttttgcatcagggctta
gtagcggaaacgagtgatggctatcgggtactgaagctcaacggccacagttgggaagtt
ttacgcaaacagcgggaagtgaaaatcgcggtagaacggcggcaaacggccccagaactt
ttggggatttctgaaagtcgtctcgatgcggaaattctcttcgggcaactacgacaactg
cggaaacaattggccgatgcaaattgggtcgccccctacatggttttttccgacgcaacc
ctccggcaaatggccaagcggcgaccccgcacccaagcggatttttgtctaatttccggg
gtaacaagtgcgaaatatcagcgttacggggagcctttcctcgcggcgattcaggaattt
tgtgccagccaagggccaccgaaaccccagattcatagcactcagttactcaccctccag
ctttatcaacagggcctctcggttacagaaattgctaagcagcgcaatctaacggcgggg
acgatcaacgaacatctggcaacgttattacagagtggtgagattaccgatctagaccgt
ctcgttaaaccagaagcccaggtggaaatcgaaaaggcgatcgccaccgtggggccagag
tccttaacgcaattgcgggagcacctccaggaaaaatacagctacgatgcgattaaactg
gtgcgggctaaactgctaaaaaccgcacaatcagcctag
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