Picosynechococcus sp. PCC 7003: AWQ21_09800
Help
Entry
AWQ21_09800 CDS
T05991
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syl
Picosynechococcus sp. PCC 7003
Pathway
syl03410
Base excision repair
syl03430
Mismatch repair
syl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWQ21_09800
03430 Mismatch repair
AWQ21_09800
03440 Homologous recombination
AWQ21_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syl03400
]
AWQ21_09800
DNA repair and recombination proteins [BR:
syl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AWQ21_09800
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWQ21_09800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWQ21_09800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ANV84651
LinkDB
All DBs
Position
2050047..2052332
Genome browser
AA seq
761 aa
AA seq
DB search
MNWQVLATPEVPDSFRRRVEILTDGKGDRHLAQLLWQRGFNDENTLAGFLNPEAYASTSA
FAFGQEMKRAVHRLVQAKERGEKVAIWGDFDADGVTATSVLWEGLGHFFPQETQLIYYIP
NRLTESHGLNNPGIDHLQTWGASLIITCDTGSTNLTEITYAKSLGLDLIITDHHTLPETR
PDVLSIINPRYFAENHPLFHLSGVAVAYKLVEALFETLPDPARPPVTDLLDLVAIGLIAD
LVALKGDCRYLAQVGIQALQKQTNPKTVVHPGIKALLENCRKTGDRPTDISFGIGPRINA
VSRIYGDASFCVELLTSRERGRCGYLAQQTELANARRKEIQQKVVQQAKAQIETLDLSTT
SVLVLCDAQWQGGVLGLVASQIAQTFGRPTILLTYDPQQDLWKGSARSAHGIDLYDLVQA
QGHLLHRFGGHPFAAGLSIRPENLAMFKTAINQQARQQWGGHVETHQGEITVDLVVAIAD
LGESLFQSLECLEPFGMGNPKPKLLVKNCGLTVTGFKKLRDKFNNKLNYFKTNFELWDDT
DQINGTWWGGHPDDLTQGAGLDVVVELDRKENQTQGQYFVRLMAVAPTANIAAEPSSQTL
FDFRGQSLPQGDLDQYVLQQDCPVTWQELYRNYQRAIAIGKPLALYYVSPTADTPEQHFK
ILIGIAKYLLTQDQKVSLADLKAKLHCGDRPLDFGLKALSNVGFVAEIEAGQVRFQQATV
TPDPEAFAQFKQAILEEQFQRQYFAQAPLAVIRATLEKIAV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgaattggcaggttttagcaacaccagaagtgccggactcctttaggcggcgggtcgaa
atcctgacagatggcaaaggcgatcgccatttagcccaactcttgtggcaacggggcttt
aatgatgaaaatactttggctggcttcctcaacccagaggcttacgcgtcaacttctgcc
tttgcctttggccaagaaatgaaacgggctgtgcaccgattagtgcaggcaaaggaacgg
ggcgaaaaagtcgcaatttggggtgactttgatgctgatggcgtcacagcaacgagtgtt
ttatgggaaggattagggcattttttcccccaagaaacccaattgatttattacattccc
aatcgtttaacggaatcccatggtttaaataatccaggcattgatcaccttcaaacttgg
ggtgcaagtttaattattacctgcgacacaggcagcacaaaccttacagaaattacctac
gccaaaagccttggcctagatctgatcattaccgatcatcacaccttaccggaaaccaga
cccgacgttttatcgattattaatccccgttactttgccgaaaatcatcccctatttcat
ctgtctggggttgccgtggcctacaaattagttgaagcgttatttgaaactctaccggat
ccggcaaggccgccggttactgatctcttagacctcgtggcgattggtctaattgcggat
ttggtggccctcaagggagattgccgctatctggcccaagtggggatccaagccctccaa
aaacaaacgaatcctaaaactgtcgtccatccaggcattaaggcgctcctcgaaaactgt
cgtaaaaccggcgatcgcccgaccgatatttcctttggcattgggccacggattaatgcc
gttagtcgcatttatggtgatgctagtttttgtgtggaactgctcaccagtcgtgaacgg
ggccgctgtggctacctcgctcaacagacagaactcgccaatgcccgccgtaaagagatt
caacaaaaggttgtccagcaggccaaggcccaaatcgaaaccctagatttatcaactacc
agcgttttagtgctctgtgatgcccagtggcaggggggcgtactgggattggtggccagc
caaattgcccaaacttttggtcgcccgactattcttttaacctacgacccgcagcaggat
ctctggaaagggtcagcccgttcggcccatggcatcgatttgtatgatttggtgcaagcc
caaggccatctactgcatcgcttcggcgggcatcctttcgcggcgggtttgagtatacgg
cccgaaaatttggcgatgtttaagacggcgattaatcagcaggccaggcaacagtggggc
ggccacgttgagacccaccagggagaaatcaccgttgatcttgtggtggcgatcgccgac
ctcggtgaatcattatttcaatccttagaatgcctagaaccctttggaatggggaatcca
aaaccgaaattattggtgaaaaactgcggcctcacggtcactgggtttaaaaaattgcgt
gataaattcaacaacaaattgaattacttcaagacaaattttgagctttgggatgacaca
gatcaaatcaatggaacttggtggggcggccatcccgacgatttgacccagggcgcggga
ctggatgtggtggttgagctagaccgcaaagagaaccaaactcaagggcaatattttgtg
cgccttatggctgtggctccgaccgcaaatatcgccgccgaaccaagctcacaaacattg
ttcgattttcggggtcagtccctccctcagggggatttggatcagtatgtactgcaacag
gattgtccggtcacttggcaggagctttatcggaattatcagcgggcgatcgccatagga
aaaccccttgccctctactatgtttcaccgactgccgacactccggaacagcattttaaa
atcctgattggcattgcgaaatatttactgacccaggatcaaaaagtctccctagctgac
ctgaaagcgaaactccattgtggcgatcgccccttggactttggtctaaaggctctcagt
aatgtcggctttgtggcggagatcgaagcagggcaagtgcgtttccagcaagcgaccgta
acccctgatccagaagcctttgcccaatttaaacaggcgatcctcgaagaacagtttcaa
aggcagtattttgcccaggcgcccctcgctgtcatccgggccaccctcgaaaaaatcgcg
gtctaa
DBGET
integrated database retrieval system
