Picosynechococcus sp. PCC 7003: AWQ21_11420
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Entry
AWQ21_11420 CDS
T05991
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syl
Picosynechococcus sp. PCC 7003
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syl03400
]
AWQ21_11420
DNA repair and recombination proteins [BR:
syl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWQ21_11420
Archaeal homologous recombinant proteins
AWQ21_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_27
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran_CTD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ANV84927
UniProt:
A0A1B1TRH6
LinkDB
All DBs
Position
complement(2386588..2389611)
Genome browser
AA seq
1007 aa
AA seq
DB search
MTPLKLTLKNFLSYRDAVLDFTGFHTACICGPNGAGKSSLLEAVTWVIWGKSRTSSADDV
IHMGEMDVRVDFELLCHQQVYRIIRMRSRGRGATLQFQVRSPTGDFTAITGKGIRETQEL
IDQEIKLDYDTFINSAYLRQGHADEFMVAKPADRKKILSDLLKLDRYESLAQLAKDKARS
FKLKADLLEESLAPQTEQLRAKPQLEADLAAIEQTISEGKQQENQLQDQLQKIQAIAQQQ
QLLQSQAETLQQQHQRRHQDLTRLSTQAQQLQQELAQNTAILHQADTIEAEYQRWQTLQQ
QEEQLNQKSQQYQDLQQEQQTIQQNIQAEENEQQRQIQQLEVQIQTLIQQQAEVQETLAI
APDLTSALDQLERTRNQIKHLEAAHHQAQPLLQQRQQLENQISQAAEKLKLQLAASRQQQ
QNLAEKIAQIPQQRAELQRLDQTMADLDHQKKHLDQIQQQHLDISTQQVRLQDAERNCQT
QLQELQQKLALLQQPGATCPLCEQNLDHDHHQNVMAKTQAQYSAIEAEILTFQNELKRCG
QLLRDYHQELKAVDQVRSRYESYDQQMIRLEQAIETNQALEKELKQVEQELLTLERALHL
EAYAEDLRAELAEVQHQLDTLQYDESQLAIARETEKKYRGAELKEVELKQARQRLEALQR
ELPQREAELKAQRHQLDQNRHTSPWQVRLAQLQEQLNALNYDRSTHQQLRQALQQGQIWQ
QRHLELSQAQRQQTSLETQLQEVNQRQTVAQTELAQLEQQIAQLQENLDNIHADQGEINH
LESQLQTCRQALETAITQRGQRQQSLENLRAIALAQKNSKTELKELRRQYRIHHELGQAF
GKNGIQALMIENALPQLEAETNQILGRLTEHQFHVQFLTQKAKKGSKKTSAQMIDTLDIV
IADARGTRAYETYSGGEAFRINFSIRLALAKLLAYRSGTTLQMLVIDEGFGTQDTEGCNR
LIGAINAIAADFACILAVTHIPQFKEAFQSRIEVYKDQQGSQLQVNN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccctaaaactcaccctgaaaaatttcctcagttaccgtgatgccgttttagat
ttcacgggctttcacacggcctgtatttgtggcccaaatggggccggaaaatcatccttg
ttagaagcagtaacctgggtgatctggggcaaaagccgcaccagcagtgccgatgatgtg
atccacatgggcgaaatggatgtgcgggtcgattttgagttgctttgtcaccagcaggtt
tatcgaattattcggatgcgatcacgggggcgaggggcgactttgcaattccaagtgcga
tcgccgacgggggactttaccgcaattacaggtaaggggatccgggaaacccaagaactc
atcgatcaagagatcaagctagactacgacacctttattaattccgcctatctacgtcag
ggccatgccgatgaatttatggtggccaaacctgcggatcgcaaaaagattttgagcgat
ctcctcaagcttgaccgctacgaaagcctcgcccaactcgcgaaggacaaagcgagatct
tttaaactcaaggccgatctcctcgaagaaagcctcgccccccaaaccgagcaactccgg
gcaaaaccccagctagaagcagacctcgctgccatcgaacagaccattagcgagggtaag
caacaagaaaatcaactccaggatcagctccaaaaaattcaggcgatcgcccaacaacag
caactcctgcaaagccaagctgaaacgctccagcaacagcaccagcgccgccaccaagac
ctcactcgcctcagtacccaggcccaacagctccagcaagagttagcgcaaaatacagcg
attctgcaccaagccgacaccatcgaagccgaataccaacgctggcaaaccctccagcag
caggaagaacagctcaaccaaaaatcccagcaataccaagacctccagcaggagcaacaa
accattcagcaaaatatccaagctgaagaaaatgagcagcaacggcagattcagcagcta
gaagtgcagatccagaccctcatccagcagcaagcagaagtccaagaaaccttggcgatc
gcccccgacctgaccagcgccctagaccaattagaacgcacccgtaaccagatcaagcac
ctggaagcggcccaccaccaagcccaacccctactccagcaacggcaacagttagaaaac
caaatcagccaggccgccgaaaaactaaagttgcaactggccgcatctcgacaacaacag
caaaacctcgctgaaaaaattgcccaaattccccagcagcgggcggaattgcagcgcctc
gatcaaaccatggccgatctagaccaccagaaaaaacatctagaccagattcagcaacaa
caccttgatatttccacccaacaagtccgtctccaggacgccgagcgcaactgccaaaca
caactccaggagctccaacaaaaactcgccctgctgcaacaaccgggggccacttgtccc
ctctgcgaacaaaaccttgaccatgaccaccaccaaaatgtgatggccaaaacccaggcc
cagtacagtgccattgaagcagaaattctgacgtttcaaaatgaacttaagcgttgtggt
caattgctgcgtgactaccaccaggaactgaaagctgtcgatcaagtccggagccgctat
gaaagctatgaccaacaaatgatccgccttgagcaggccattgaaaccaaccaagccctc
gaaaaagaactgaaacaggtagagcaggaattattaaccctagagcgggccctccaccta
gaagcctacgctgaggatctgcgggcagaattggcagaagtgcaacaccagttagacacc
ctgcaatacgatgaatcccagttggcgatcgccagagaaaccgaaaaaaaataccgtggg
gcagaactaaaagaggtggaattaaaacaagcgcgccaacgcctggaggcccttcaacgg
gaactgccccaacgggaagcagaactgaaggcccagcgccatcaactcgaccaaaatagg
cacacatctccctggcaagtccgtcttgcgcaacttcaggagcagttaaacgccctcaac
tacgaccgcagcacccaccaacaactccgccaggcactccaacaggggcaaatttggcaa
caacgtcacctcgaactgagccaagcccaacggcaacagaccagcctggaaactcaacta
caggaggtaaaccagcgccaaacggttgcccaaacggaactagcgcaactcgaacaacag
atcgcgcagttacaagaaaatttagataatatccacgccgatcaaggggagatcaaccac
ctggaaagtcaattgcaaacctgtcgccaagccttggaaacagcaatcacccagcgcggc
caacgacagcaatctttagaaaatctccgggcgatcgcccttgcgcaaaaaaacagcaaa
acagaactcaaagaactacggcgtcaataccgcatccaccacgaactcggtcaagccttc
gggaaaaacggcattcaggccctaatgatcgaaaatgccctgccccaactagaagccgaa
accaatcaaatcctcggtcgcctcaccgagcaccaattccatgtgcaatttctcacccaa
aaggctaagaaaggcagcaaaaaaactagcgcccagatgatcgataccctcgatattgtc
attgccgatgcccggggcacccgcgcctacgaaacctattccgggggggaagcattccgg
atcaacttttcaatccgcctcgccctcgcgaaactcttagcctaccgttccggtacaacg
ctccaaatgctggtcattgatgaaggctttggcacccaggataccgaaggctgtaatcgc
ttgattggagccatcaatgcgatcgccgctgactttgcctgtattctcgctgtgactcac
attccccagttcaaggaagcctttcaaagccgcatcgaagtctataaagatcagcaaggc
tcccaactccaggtcaacaactaa
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