Picosynechococcus sp. PCC 7003: AWQ21_11910
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Entry
AWQ21_11910 CDS
T05991
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
syl
Picosynechococcus sp. PCC 7003
Brite
KEGG Orthology (KO) [BR:
syl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syl03016
]
AWQ21_11910
Enzymes [BR:
syl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AWQ21_11910
Transfer RNA biogenesis [BR:
syl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AWQ21_11910
Prokaryotic type
tRNA splicing ligases
AWQ21_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ANV85017
LinkDB
All DBs
Position
complement(2501747..2502928)
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AA seq
393 aa
AA seq
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MPHQPLPIQTEKPVYSWAGHNLGSQELQMAKNVASLPFVFKHVSLMPDVHLGKGALVGSV
IATKDAIIPAAVGVDIGCGMAALKLPFKGDRLDGKLKQIRKDLEAVIPVGFDENKDVDKT
VANWGGWRNFKDLHKGVKNLEGKALKQMGSLGGGNHFIEVCLDEENNVWLMLHSGSRHIG
NKLAQCHIGTAKELLKLAETKVPDPDLAYFVKGTPEFEAYWRDLQWAQNYARFNRDVMLE
RFKKVIEKHLAGGKPTKASMFVNCHHNYAEQETHFDEDIYVTRKGAVRARQEDYGIIPGS
MGAKSYIVKGKGNVMSYCSCSHGAGRLMSRAKAKKTFTLDDLVAQTAGVECRKDSGIIDE
IPAAYKPIEQVMAQQTDLVEVVATLKQVLCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccaacccctaccgatccaaaccgaaaaaccagtttattcttgggctggccat
aatctaggctcccaggaactccaaatggcgaaaaatgttgcttcgttgccgtttgtgttt
aaacatgtgtccctgatgcctgatgttcacctagggaaaggagccttagtgggttctgtc
attgccacaaaggatgcgatcattccagcggcggttggggttgatattggttgtggcatg
gccgccctcaaattgccctttaaaggcgatcgcctcgacggaaaactcaagcaaatccgc
aaagatctcgaagccgtgatccccgttggtttcgacgaaaacaaagacgttgataaaacc
gtggccaattggggcggctggcgaaattttaaagatctccacaaaggggtaaaaaatctc
gaaggtaaagccctcaaacaaatgggttccctcggtggtggcaatcacttcattgaagta
tgtctcgatgaagaaaataatgtgtggttaatgctccactccggttcccgtcacattggc
aacaaactcgcccaatgccacattgggacggcaaaggagctcttgaaactcgcagaaacc
aaagtcccagatcccgatctcgcctattttgtcaaaggaacgccggaatttgaagcctat
tggcgcgacctccagtgggcccaaaactatgcccggtttaatcgcgatgtgatgctggag
aggtttaaaaaagtcatcgaaaaacatctcgctggcggcaaaccgacaaaagcctcgatg
tttgtgaattgccaccataactacgccgaacaagaaacccattttgacgaagacatctat
gtcacccgcaaaggggccgtgcgagcacgccaggaagactacggtattatccccggctcc
atgggcgcaaaatcctacatcgtcaagggcaaaggcaatgtgatgagttattgttcctgt
agccacggtgctgggcgtttaatgtccagggccaaagccaaaaaaacctttactttagac
gacttagtggcccaaacggctggggttgaatgtcgcaaagatagcggcattatcgacgaa
attcctgccgcctacaaacccatcgagcaggtgatggcccaacagacggatttggtagag
gtcgttgctaccctcaagcaggttttgtgtgtaaaaggctaa
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