Synechococcus sp. LTW-R: H0O22_11155
Help
Entry
H0O22_11155 CDS
T11767
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
sylt Synechococcus sp. LTW-R
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
zf-tcix
DUF4796_N
DUF7340
Zn_Ribbon_TF
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
QNG29269
LinkDB
All DBs
Position
complement(2007707..2009743)
Genome browser
AA seq
678 aa
AA seq
DB search
MTSEPQTRASELRALLNQAAHAYYVLDAPLMEDAVYDRLYRELLDLESADPSLISADSPT
QRVGGAPAAGFSSVRHRIGLLSLDNAFNTSELEAWYGRLLKVLDREPGTALPMVGELKID
GNALALSYENGVLVRAATRGDGEQGEEITANVRTIASVPLRLQLENPPAWLEVRGEALIP
DGTFAAINSERQARGEALFANPRNACAGTLRQLDPKVVAARKLDFFAYTLHLPEDWTDGP
GSQWDALEWLKRAGFKVNPNAALLPDLGAVAAFFEQWDEGRRQLNYATDGVVVKLNDLRL
QDSAGFTQKAPRWAIALKYPAEEAPSKLLRLSCQVGRTGVITPVAEFEPVPLAGTSVSRA
TLHNADRLVELDLHAGDTIVVRKAGEIIPEVVRVLPELRPAGSQRLELPHTCPECGSELV
REEGEAATRCVNSSCPAILRGALRHWVSKGALDVDGLGSKLIEQLVDRGLVGSIADLYRL
DGALLCSLERMGSKSAENLVAALAQSKQQPWHRQLYGLGIHHVGEVNAKALAKAFPSAAD
LATAATETPEAITAVYGIGGEIAQSLQQWFSTGANQELLTSLERLGFSLASADEEQPEPS
GPAPLAGQTFVLTGTLPSLSRSQAQALIEAAGGKVTGSVSKKTSYVVAGEEAGSKLSKAE
SLGIPVLDEASLQALLVP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcgagccccagacacgcgccagcgaactgcgtgcccttctgaaccaagccgcg
cacgcttactacgtgctcgatgcccccttgatggaggacgcggtctacgaccgcctctat
cgcgagctcctggatctggagagcgccgaccccagcctgatcagcgccgatagccccacc
cagcgcgtcgggggagcaccggcggcgggcttcagcagcgtgcgccaccgcatcggcctg
ctcagcctcgacaacgccttcaacaccagcgagctcgaggcctggtacggccgactgctc
aaggtgctcgatcgcgagccgggcaccgcgctgccgatggtcggtgagctgaagatcgac
ggcaacgccctcgccctcagctacgagaacggcgtcctggtgcgggcggccacccgcggc
gacggcgagcaaggggaggagatcaccgccaatgtccgcacgatcgcctcggtcccgctg
cggttgcagctggagaacccaccggcctggctggaggtgcgcggcgaggccctgatcccc
gacggcacctttgcggccatcaacagcgagcgtcaggcccgcggcgaggccctcttcgcc
aacccccgcaacgcctgcgccggcaccctgcggcaactggatcccaaggtggtcgccgcg
cgcaagctcgacttcttcgcctacaccctgcacctccccgaggactggacggacggcccc
ggcagtcagtgggacgccctggagtggctcaaacgggccggcttcaaggtcaatccgaat
gccgccctgcttcccgatttaggggcggtcgcggctttctttgagcagtgggacgagggc
cgtcgccagctgaactacgccaccgatggcgtcgtcgtgaagctcaacgacctcaggctc
caagacagtgcgggcttcacccagaaggctccccgctgggccatcgccttgaaatacccg
gccgaggaggcccccagcaaactgctgcggctcagctgccaagtgggacgcaccggcgtg
atcaccccggtggccgaatttgaacccgtgcccctcgccggcaccagcgtcagtcgggcc
accctccacaacgccgatcgcctggtggagcttgatctccacgccggcgacaccatcgtc
gtgcgcaaggccggcgaaatcattccagaggtggtccgggtcctgccggagctgcgcccc
gctggatcccagcgactggaactcccccacacctgcccggaatgcggctcggaactggtc
cgcgaagaaggggaagccgccacccgctgcgtgaacagcagctgccctgcgatcctccgc
ggcgcgctgcgccactgggtcagcaagggcgcccttgatgtcgatggcctgggcagcaag
ttgattgaacaactggtggaccgcggcctggtgggctccatcgccgacctctaccggctg
gatggggccctgctctgcagcctggagcgcatgggcagcaagagcgccgagaacctcgtg
gccgccctggcccagtccaagcaacagccctggcaccggcagctctacggcctcggcatt
caccacgtgggcgaggtcaacgccaaagctctcgccaaggccttccccagcgcggcggac
ctggccaccgccgccacggagacccccgaagcgatcaccgccgtctacggcatcggcggc
gagatcgcccaaagcctccagcaatggttctccaccggcgccaaccaggagctgctcacg
agcctggagcgcctgggcttcagcctggccagcgccgacgaggagcagcccgagccgagc
ggccctgccccactggccggccaaaccttcgtgctcaccggcaccctgcccagcctcagc
cgctcccaggcccaggccctgatcgaggccgccggaggcaaggtcaccggctcggtcagc
aaaaaaaccagctacgtcgtggcgggcgaggaagccggcagcaagctgagcaaagcggag
agcctggggatccccgtgctcgacgaagccagcctgcaagccctcctcgtcccatga
DBGET
integrated database retrieval system
