Symbiopectobacterium purcellii: K6K13_07620
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Entry
K6K13_07620 CDS
T07463
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sym01002
]
K6K13_07620
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
sym02042
]
K6K13_07620
Enzymes [BR:
sym01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
K6K13_07620
Peptidases and inhibitors [BR:
sym01002
]
Metallo peptidases
Family M9
K6K13_07620
Bacterial toxins [BR:
sym02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
K6K13_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
CsgG
Motif
Other DBs
NCBI-ProteinID:
QZN97215
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Position
1640815..1642719
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AA seq
634 aa
AA seq
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MSVNLSGVGYNHHSNVLFDEMTNVRNKKNETVFEKKRHSSVENEVGKYIPSIYSNSLQSK
MKFTVLEKKLMEDLHDEKELFLKTSYQHSKQTLTASIKIINKLMLEPEINKRDLGLLSKY
IESFYHRVDTSGPYWKSDNIIVSRTLSKIGDYLAKTYNNFHGISNEPDKALSGLTSSWVG
AMIEMTKNNSKGDNPTINYKSLNAILEYHVLNQEKLLDNYEFSVNTGKLLNLIYHIRPGS
LDSQILSKSKGAIEKNLFKLVSQSLNIVNSKKNNFPLYHIRCALDVLSSIINSEKRNNPK
VSFETQKNIDFNLGEILKKYNSLPAKSDLREEINVVLTKYLEDTGRHSEKNNSSVFSGFL
KPILEKEFIPHDFKLNSGYRIQSSYHFNNEEKNKLNVIATKVLKNFHESFGEKRVRDDNS
KPLEIIVMKNKDHYHRYGNYPFRIDTNNGGVYIEGDSKNPNNQPRIFVYMKDNNIHNFGH
EIVHYLDGKYNKYGDANMYPSEEVTWWSEGLAEYLSHGKKNEYAESVLMNCPPENRPSLI
QAIDIDGFSANGHSERLYAWPYFVQKFLDSSPQMRSVRGELVRSLRQEIGSSGDKPSYSR
VLKNFGQKYNEEFYYWLNQQSNHSTSINRYSTRR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaatttaagtggtgtcggttataatcatcattcaaatgtattgtttgatgag
atgactaatgtaaggaataaaaaaaatgaaactgttttcgagaaaaaaagacattcaagt
gtcgaaaatgaagttgggaaatacatcccgtcaatatattcaaattctcttcaaagtaaa
atgaagtttaccgtattagaaaaaaaattaatggaagatcttcatgatgaaaaagaatta
ttcttaaaaacaagttatcaacactctaaacaaacattaacagcctcaattaaaattatt
aataaattaatgctcgagccagagataaacaaacgtgatcttggtttgttgtcaaaatat
attgaaagtttttatcatagagttgatacatcaggtccatattggaaaagcgacaacatt
attgtgtctagaacattaagcaaaataggagactatcttgctaaaacatataataatttt
catggcatatcaaatgaacctgataaagcgttatcaggtttaacaagttcttgggtaggc
gcgatgatagagatgaccaagaataattcaaaaggggataatcctactataaattataaa
agtctcaatgcaatattggaatatcatgttttaaaccaagagaaattattggataattat
gaattctcagttaacactgggaagttactaaatttaatttatcatataaggcctggttca
ctagatagccagatattatctaagagtaagggtgcgatagagaaaaatttatttaagctt
gtcagtcaatctttaaatatagtcaattccaaaaaaaataatttccctctttatcatatt
cgctgtgccttggatgtactgtcatccatcatcaattctgagaagagaaacaaccctaaa
gttagttttgaaacacaaaaaaacattgattttaatttaggtgaaatattgaaaaaatat
aactccttgcccgccaaaagtgatttgcgtgaggaaattaatgttgttttgactaaatat
ttagaagatactgggagacattctgaaaaaaacaactcgtccgtgttttctggttttttg
aaacctattttagaaaaagaatttatcccgcatgatttcaaacttaatagcggatacaga
atacaatcttcttatcattttaataatgaagagaaaaacaaactaaatgttatagcaact
aaagttctaaagaattttcacgaatcattcggggaaaaacgcgtaagagatgataattca
aaaccattggaaattatagtgatgaagaataaagatcactatcatcgatatggtaactat
cctttccgtatagacacaaataatggcggtgtttatattgaaggggattctaaaaaccct
aataatcagccacgtatttttgtttatatgaaagacaacaatatccataattttggacat
gaaattgttcattatcttgatggtaaatataacaagtatggtgatgctaatatgtatccc
tcagaggaggttacatggtggagcgaaggtttggcagagtatctatcgcatgggaaaaaa
aatgaatatgcagaaagtgttttaatgaattgtccaccagaaaacagacctagcttaatt
caagcaattgatatagatggtttttctgctaatggacatagcgagagattatacgcctgg
ccatatttcgtgcaaaaattcctcgacagttcaccacaaatgcgttctgttcgcggtgaa
ttagttcgctccctaagacaagaaattggatccagcggtgataaaccttcttattctaga
gttttaaaaaactttggccaaaaatacaacgaggagttttattattggctaaatcaacag
tctaaccattcaaccagtataaatagatactctactcgcagatga
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