Symbiopectobacterium purcellii: K6K13_07835
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Entry
K6K13_07835 CDS
T07463
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6K13_07835 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sym03019
]
K6K13_07835 (rhlE)
Enzymes [BR:
sym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K6K13_07835 (rhlE)
Messenger RNA biogenesis [BR:
sym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6K13_07835 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
HI1480
UvrD-helicase
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QZN97251
LinkDB
All DBs
Position
1695136..1696500
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AA seq
454 aa
AA seq
DB search
MSFSSLGLSADILRAVEEQGYREPTPVQRQAIPVVLSGQDLMASAQTGTGKTAGFTLPLL
QLLSAKPSDVKGRRPVRALILTPTRELAAQIGENVQAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSRIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKALANTLLTRPASVEVVRRNTPSELVTQNVHFVDKKRKRELLSLLI
GKGNWQQVLVFTRTKHGANHLAELLGKDGITAAAIHGNKSQGARTRALANFKEGSIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDI
ERLLKREIPRIAEPGFEPDPNIKAEPIQNGRQSQRGAPRGGDRSGSERHSTAPRRQRSGE
GSPSGEQRRGGQGKPAASRSQGNGQRRPARARSE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcatctctcggcctgagcgccgatattctccgtgctgttgaagaacagggc
tatcgtgaacctacgccggtacaacgccaggcgattcccgtggtgctgtcgggtcaggac
ttgatggccagcgcgcaaaccggtaccggtaaaacggctggttttaccctgccgctgttg
cagctgctaagcgccaagcccagtgacgttaaaggccgtcgcccggtacgtgccttgatc
ctgacaccgacgcgtgaactggctgctcagattggtgaaaacgtgcaggcatacagcaag
tacctgcgcttgcgctcgctggtggtgttcggcggtgtcagtattaatccgcagatgatg
aaactgcgcggtggcgtcgacattctggtggcaacgccgggacgtctgctggatctggag
catcagaatgcggttgacctttcccgtatcgaaatcctggtgctggatgaagcggatcgc
atgctggacatgggctttatccacgacattcgtcgtgtgctggcaaaattgccggccaaa
cgccaaaacctgctgttttcggccaccttctcggatgagatcaaggcgctggccaataca
ctgctgacgcgccctgcgtcggtcgaagtggtgcgtcgcaatacgccatcggaattggtg
acccagaacgtgcactttgtcgataagaaacgcaagcgcgagctgctctctttgctgatc
ggcaaagggaactggcagcaggtgctggtgtttacccgtaccaagcacggtgccaaccac
ttggctgagctattgggcaaagacggcattaccgccgcggctatccatggcaacaagagc
cagggagcccgtacccgtgcgttagcgaatttcaaggaaggatcgattcgggtgctggtg
gcaacggatatcgctgcgcgcggtctggatatcgaccaactgccccatgtggtgaactat
gagctgcccaacgtgccggaagactacgtgcaccgtatcgggcgtaccggtcgtgcggaa
tctaccggtgaagcgttgtcgctggtgtgtgtcgatgagcataagctgctgcgcgatatc
gagcgactgctgaaacgcgaaattccacgcattgccgagccgggctttgagcccgatccg
aatattaaggcagagccgattcaaaatgggcgccaaagccagcgcggtgcgccgcgtggc
ggcgatcgttccggcagtgaacgccacagcacggcaccgcgccgccagcgcagtggcgaa
ggttcgccttctggagagcaacgtcgtggcggtcaggggaaacctgccgcatcacgctcg
cagggtaatggtcagcgtcgcccggcgcgtgccagaagcgagtaa
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