Symbiopectobacterium purcellii: K6K13_09100
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Entry
K6K13_09100 CDS
T07463
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sym03016
]
K6K13_09100
Enzymes [BR:
sym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K6K13_09100
Transfer RNA biogenesis [BR:
sym03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K6K13_09100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QZN97465
LinkDB
All DBs
Position
complement(1941665..1943602)
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AA seq
645 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTDKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VATLHTDKDREIAEPESLIEPFLTRFVGRVQKKDDRFAVLPDHPLLKEAIPCRTGRDVNH
TFQDGDWAVAEMRRHPLKGDRSFHAELTQYITTGDDPLAPWWVTLSRHNLERTAPEMDSE
LTLNDSNLTREDLTALTFVTIDSASTEDMDDALYAKDNGDGTLELTIAIADPTAYVEAGS
TLDTLARQRAFTNYLPGFNIPMLPRVLSDDLCSLRALARRPAVVCRVTVAADGTLGDDVQ
FFAAWVESKAKLVYDNVSDWLEQQGEWQPENDAVAEQIRLLHRIGLARSTWRATHALVFK
DRPDYRFLLGEQGDVLDIVVEQRRIANRIVEETMITANICAARMLKEKLGFGIYNVHNGF
EPTQVDQAVTVLSNNGIEADAAALLTLDGFCKLRRELDALPTSFLDSRIRRFQTFAEVST
TPGPHFGLGLDAYATWTSPIRKFGDMINHRLLKAIICQQPAEKPQDDITQHMAERRRLNR
MAERDVGDWLYARFLKPKAGTTARFRAEIIDVTRGGLRVRLLDNGAVAFIPASFIHAVRD
ELVSSQETGTVSVKGEVVYRQSDTLDVVLTDVRMETRSIIAKPAA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctgcttgcccagctaaaacagcaacttcactcccaaactccg
cgtgctgaaggcgtggtgaaaggcactgataaagggttcggctttttagaagtcgacgca
caaaaaagctactttattccaccgccgcagatgaagaaggtgatgcatggcgatcgtatc
gttgcgacgctgcacaccgacaaagatcgcgaaatagcagaaccggaatctctgattgaa
ccttttttgacgcgctttgttggccgggtgcagaaaaaggatgaccgctttgccgtcctg
cccgatcatccgttgttgaaagaggcgattccctgccgtaccgggcgcgacgtaaatcac
acctttcaggatggtgattgggcggtggcggaaatgcgccgtcatcctctcaaaggcgat
cgcagttttcatgctgaattaacacaatacatcaccactggcgacgatccgctggcgccg
tggtgggtgacgttgtcacgtcacaatcttgagcgtaccgcgccagaaatggacagcgaa
ttgacgctcaatgatagcaatctgacgcgcgaagatttgaccgcattgacctttgttacc
atcgacagcgccagcaccgaagacatggacgatgcgctgtatgccaaagacaacggcgac
ggcaccttggaactcactatcgccattgccgatccgactgcctatgtggaagcgggcagt
acgctggatacgctggcgcgtcaacgcgcgtttaccaactatctgccgggattcaatatt
ccgatgctgccgcgcgtgctttccgacgatctctgctccctgcgcgcgctagcgcgccgc
ccggcagtggtgtgccgcgtcaccgtcgcggctgacggtacgctgggtgatgatgtgcag
ttctttgccgcctgggtagaatccaaggccaagctggtttacgacaacgtttcagactgg
ctggagcagcagggtgaatggcagccggagaacgatgccgttgccgaacaaatccgtttg
ttgcaccgcatcggtctggcccgtagcacctggcgcgccacccatgcgctggtatttaaa
gaccgtcccgattaccgtttcctgctcggcgagcagggcgatgtgttggatatcgtggtt
gagcagcgccgtatcgccaatcgcatcgtcgaagaaaccatgatcaccgccaatatctgc
gctgcgcgcatgcttaaagagaagctgggctttggcatttacaacgtgcataacggcttc
gaaccgacacaggtcgatcaggccgtgacggtgttaagcaacaacggcattgaagcggat
gctgccgcgctgttaacgctagacggcttttgcaaactgcgccgtgagcttgatgcgtta
ccgacgtcattcttagacagccgcattcgccgcttccaaaccttcgctgaagtctctacc
acgccgggtccccatttcggtctggggctggatgcgtatgccacctggacctcgcccatt
cgtaagttcggtgacatgatcaaccatcgcctgttgaaagcgattatttgccagcagcca
gcagagaaaccgcaagatgacatcacgcaacacatggcggaacgccgccgtttgaaccgg
atggcagagcgtgacgtcggtgactggctgtatgcccgtttcctgaaaccgaaagccggt
accactgcccgtttccgtgccgagatcatcgatgtgacgcgcggaggtctgcgcgtgcgt
ttgctggacaacggtgccgttgcgtttatcccggcttcgtttattcacgccgtgcgcgat
gaattagtcagcagccaggaaaccggcacggtctccgtcaaaggtgaagtagtctaccgc
caaagcgatacgctggacgtagtattgaccgacgtgcgcatggaaacgcgtagtatcatt
gccaaacccgcagcataa
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