Symbiopectobacterium purcellii: K6K13_09855
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Entry
K6K13_09855 CDS
T07463
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym00541
Biosynthesis of various nucleotide sugars
sym01100
Metabolic pathways
sym01250
Biosynthesis of nucleotide sugars
Module
sym_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K6K13_09855 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sym01005
]
K6K13_09855 (kdsA)
Enzymes [BR:
sym01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
K6K13_09855 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sym01005
]
Lipid A
K6K13_09855 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
QZN97593
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Position
2130919..2131773
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AA seq
284 aa
AA seq
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MKNKVVKVGDIPVANDAPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFLELKQTFGVKVITDVHEAQQAQAVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFISPGQIGNIVDKFKEGGNEQVILCDRGSNFGYDNLVVD
MLGFNVMKQVSGGCPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLNKLEPFLQQMKAIDDLVKQFPELDTNN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaagtggtcaaggttggtgatattcctgttgccaacgacgcgccttttgtc
ctgtttggcggtatgaatgtgcttgaatcgcgcgatctcgccatgcgtatttgcgaacat
tacgtcaccgtcacgcaaaaactgggcattccctacgtgtttaaggcctcattcgacaag
gctaaccgctcctccattcactcttatcgtggaccgggtctggaagagggcatgaaaatc
ttcctggaactgaaacagaccttcggtgtgaaggtgataacagatgtgcacgaagcacag
caggcgcaagctgtcgccgacgtggtggatgtgatccagctaccggcatttttggcccgt
caaaccgatctggtagaggcgatggcgaaaaccggcgcggtgatcaatgtgaaaaaaccg
cagtttatcagcccgggacaaatcggcaatatcgttgacaagttcaaggaaggtggcaac
gagcaggttattttgtgcgatcgtggcagcaattttggttatgacaatttggttgtggac
atgttgggtttcaacgtcatgaagcaggtgtctggtggctgcccggtgatttttgacgtg
actcacgcattgcagtgtcgcgatccgttcggtgctgcctccggcggtcgtcgtggtcag
gttactgagttggctcgtgctggcatggcggttgggttggctgggttgtttattgaagcg
catccggacccggctaacgcgaagtgcgatggcccgtctgcattgccgctgaataaactg
gaacccttcttgcagcaaatgaaagcaattgatgacctggtcaaacagttccctgaactg
gataccaacaactga
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