Symbiopectobacterium purcellii: K6K13_10175
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Entry
K6K13_10175 CDS
T07463
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sym03032
]
K6K13_10175 (topA)
03400 DNA repair and recombination proteins [BR:
sym03400
]
K6K13_10175 (topA)
Enzymes [BR:
sym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6K13_10175 (topA)
DNA replication proteins [BR:
sym03032
]
Prokaryotic type
DNA Topoisomerases
K6K13_10175 (topA)
DNA repair and recombination proteins [BR:
sym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6K13_10175 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QZN97644
LinkDB
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Position
complement(2204888..2207479)
Genome browser
AA seq
863 aa
AA seq
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MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHVRDLPTSGSAAAKKSAEPGKAKKAGKK
DERTALVNRMGVDPYHGWQADYEILPGKEKVVSELKTLAANADHVYLATDLDREGEAIAW
HLREIIGGDEGRFSRVVFNEITKNAIKQAFEKPDKLNIDRVNAQQARRFMDRVVGYMVSP
LLWKKIARGLSAGRVQSVAVRLVVEREREIKAFIPEEYWELHADLQSSSAALQMQVTHVD
GKPFKPVNKAQTAAAVSVLEAARYVVAEREDKPTSSKPGAPFITSTLQQAASTRLGFGVK
KTMMMAQRLYEAGYITYMRTDSTNLSQDALTMARDYIASSFGNAYLPESANLYSSKENSQ
EAHEAIRPSDVAVLADALKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLSVNAEGYQL
RAKGRTLRFDGWTKVMPALRKGDEDRTLPTVEVGEVMTLDKLLPSQHFTKPPARYSDASL
VKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDF
TARMESSLDQVANNQAEWKGVLDEFFAEFSQQLEKAEMDPEVGGMRPNAMVLTTIDCPTC
GRKMGIRTASTGVFLGCSGYALTPKERCKTTINLIPEAEVLNVLEGDEAETNALRARRRC
GKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIENGEFRIKGYDGPVVECDKCGSDMHLKM
GRFGKYMACTNESCTNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLA
ANTFPKSRETRAPLVEELVRFRDRLPEKLRYLADAPVEDAEGNKAVVRFSRKTKQQYVAS
EKNGKATGWSAFYVDGKWTSEKK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatagttgagtccccggccaaagccaaaacaatcaacaaatat
ctgggcaatgactacgtggtgaaatcgagcgtcggtcatgtgcgtgatttgccgaccagc
ggttccgcggcggcaaagaagagcgctgagcctggtaaagcgaaaaaagccggcaaaaaa
gatgagcgcaccgcgctggtcaatcgtatgggcgttgatccgtaccacggctggcaggct
gattacgaaatattgcccggcaaagagaaagtcgtctctgaactgaaaacgttggcggcc
aatgccgaccacgtctatctcgcaaccgaccttgaccgcgaaggggaagccattgcctgg
cacctgcgggaaatcattggtggcgatgaaggccgtttcagccgcgtggtgtttaacgaa
atcaccaagaacgcgatcaagcaggcgtttgaaaaaccagataaattaaatatcgatagg
gtcaatgcgcagcaagcgcggcgttttatggaccgtgtcgtgggctacatggtttctcca
ctgttgtggaaaaaaattgcccgtgggctgtctgccggtcgtgttcagtccgttgcggta
cgtctggtggtggagcgcgaacgcgaaatcaaagccttcatcccggaagagtactgggaa
ctgcatgcggatttgcagtcatcaagcgctgcactgcaaatgcaggtgacgcatgttgat
ggcaaaccgttcaagccggtcaataaagcgcaaaccgcagcggcggtcagcgtgctggag
gccgcgcgttatgtggtcgcggagcgcgaagacaagcctaccagcagcaagccgggggct
cctttcatcacctccacgctgcaacaggcggcaagcacccgcctgggatttggcgttaaa
aaaaccatgatgatggcgcagcgcttgtacgaagcgggttacatcacctacatgcgtact
gactccaccaacctgagtcaggatgcgctgaccatggcgcgcgattacattgcgtccagc
tttggcaacgcttacctgccggagagtgcgaacctctacagcagtaaagaaaactcgcag
gaagcgcatgaagctatccgcccctcggacgtcgccgttctggcggatgcgctgaaggat
atggaagcggatgcccagaaactttaccagttgatctggcgtcaatttgtcgcttgtcaa
atgacgccggccaaatatgactccacaacgctgtcggtgaatgcggaaggttatcaactg
cgtgccaaagggcgcaccctgcgttttgacggctggaccaaagtgatgccagcgctgcgc
aaaggtgatgaagatcgcacgctgccgaccgttgaggtaggcgaagtaatgaccctggat
aaattgctgccgagccagcactttaccaaaccacctgcgcgttatagcgatgcctcgctg
gtaaaagagctggaaaaacgcggcattggtcgtccgtcaacttacgcctccatcatttca
accattcaggatcgtggctatgtgcgggtggaaaaccgccgtttctacgcggaaaaaatg
ggtgaaattgttaccgaccgtctggaagaaaatttccgtgagttgatgaactacgatttt
actgcgcgtatggaaagcagccttgatcaggtcgccaacaaccaggcggaatggaaaggg
gtgctggatgagttttttgccgaattcagccagcagttggaaaaagcggaaatggatccg
gaagtcggggggatgcgccccaatgccatggtgctgactaccatcgattgcccgacctgt
ggacgtaaaatggggattcgcaccgccagcactggcgtgttcctcggttgttccggctat
gcgttgacaccaaaagagcgttgcaaaaccaccatcaacctgatccctgaagccgaagtg
ttgaacgtgctggaaggggatgaggcggaaaccaatgcgctgcgtgcccgtcgtcgttgt
ggcaaatgcggcacggccatggacagctacctgatcgataaccagcgcaagctgcatgtg
tgcggcaataacccggcatgtgatggctacgagatcgaaaacggtgagtttcgtatcaag
ggctacgacggtccggtggtggagtgcgacaaatgcggttctgatatgcacctgaaaatg
gggcgttttggtaaatacatggcctgcaccaacgaaagctgcaccaatacccgcaagatt
ttgcgcaatggtgaggtcgcgccgccgaaggaagatccggttcccttacccgaactgcct
tgcgaaaaatccgatgcatactttgtgttgcgtgacggcgctgctggggtcttcctggct
gccaataccttccctaaatcgcgagaaacccgcgcgccgttagtggaagagctggtgcga
ttccgcgatcgcctgccggaaaaactgcgctatctggccgatgcgccagtggaagatgcc
gagggcaacaaagcggtggttcgctttagtcgtaaaaccaagcagcaatacgttgcgtcg
gagaaaaacggtaaggcgacgggctggtccgcattctatgtagacggcaaatggacctct
gagaaaaaataa
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