Symbiopectobacterium purcellii: K6K13_10600
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Entry
K6K13_10600 CDS
T07463
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sym03016
]
K6K13_10600 (rnd)
Enzymes [BR:
sym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K6K13_10600 (rnd)
Transfer RNA biogenesis [BR:
sym03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K6K13_10600 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QZN97711
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All DBs
Position
complement(2290181..2291308)
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AA seq
375 aa
AA seq
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MNYQLISDNNGLEQVCQQARQHTQVALDTEFVRTRTYYPQLGLIQLFDGETLSLIDPLTI
SAWQPFVALLQDAQVTKFLHASSEDLEVFINAFGVLPHPFIDTQILAAFLGKPLSYGFAA
LVADYQGVTLDKTESRTDWLARPLTEKQCDYAAADVFYLLPMAEKIVAETREAGWLDAAL
DECRLLCQRKQDILTPELAYREFGNAWQLRGKQLACLQLLAQWRLNLARQRDSSVNFVVR
EENLLQVARCMPSSLGELSALGLSGPEIRYHGKTLLDIVIQANALPESQYPAPIVNLIDY
PGYKRVFKDIKNLVTQVSERSGLSAELLASRRQINRLLNWHWKLFAQEGTAPEMLNGWRA
KLFDEPLRDLLAREG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttaatcagcgacaacaatggcctggaacaggtttgtcaacaggcgcgt
cagcacacacaggtcgcgctggataccgaatttgtccgcactcgcacctattatccgcaa
ttgggtctcatccagctttttgacggcgaaaccctctctctgattgaccccctcactatc
agcgcctggcagccgttcgtggcgctgttacaggatgcgcaggtgaccaagttcctgcac
gccagcagtgaagatcttgaggtgtttattaatgcgtttggcgtgttgccgcatccgttt
atcgatacacagattttggccgcttttctcggtaagcccttgtcctatggatttgcagct
ttagtggccgattatcaaggtgtgacgctggataaaaccgaatcacgtaccgactggctg
gcgcgtccgttgactgagaaacagtgtgactatgctgctgcagatgtcttctacctatta
ccgatggctgagaagattgtggccgaaacgcgtgaagctggatggctggacgcagcgttg
gatgagtgccggctactgtgtcagcgtaaacaggatattctcacgccggaactggcctat
cgtgaatttggtaacgcctggcaactgcgtggcaagcaactggcttgtttacaactgctt
gctcagtggcggctaaatctggcgcgtcagcgcgacagctcggtcaactttgtagtacgg
gaagaaaatctacttcaggtggcgcgctgtatgccgtcctcgttgggtgagttgagtgca
ttggggctgagcggcccggaaatccgttatcacgggaaaacactgctcgatattgtcatc
caggccaatgcgctgccggaatcccagtatcccgcgccgatcgttaatttgatcgactac
ccaggctataagcgcgtgtttaaagacatcaaaaatctggtgacacaggtgagtgaacgc
agtggactttctgctgagttactggcatcacggcgtcagatcaaccgcttgttgaattgg
cattggaaactgtttgctcaagaaggcactgcgccggaaatgttgaacggctggcgagct
aaactgttcgatgaaccgttgcgcgatttgttggctcgcgaagggtaa
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