Symbiopectobacterium purcellii: K6K13_15740
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Entry
K6K13_15740 CDS
T07463
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6K13_15740 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sym03019
]
K6K13_15740 (pcnB)
Enzymes [BR:
sym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K6K13_15740 (pcnB)
Messenger RNA biogenesis [BR:
sym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6K13_15740 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
TOR1L1_N
ZSWIM1-3_helical
Motif
Other DBs
NCBI-ProteinID:
QZN98110
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All DBs
Position
3366974..3368377
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AA seq
467 aa
AA seq
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MFTRVANFCRKVLSRDNDVATAEPVRQAMTVIPRDQHTLSRSDISENALKVLYRLNKSGY
EAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEV
ATFRGHHEQHQEQQLKTTSQQAQSGMLLRDNIFGSIEEDAQRRDFSINSLYYSVADFSVR
DYTGGLNDLRQGVIRLIGDPETRYREDPVRMLRAVRFAAKLNMTISPETAEPIPRLATLL
HDIPAARLFEESLKLLQAGYGYPTYRLLCEYQLFQPLFPLISRHFTPNSDSHLEKMVALV
LKNTDQRLQNDMRVNPAFLFAAMLWYPLIEHAQKLAQESGLTYFDSFALAMNDILDEQCR
SLAIPKRITSLVRDIWQLQLRLSRRQGKRAYKLMEHPKFRAAYDLLSLRAEIERQPELQR
LSQWWGEFQVATLPRQQAMLSTLDDGPTPHRHSRRRKPSAPRRERTS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atctttacccgagtcgctaatttctgtcgcaaggtactcagccgcgacaatgacgtggcc
accgcggagcccgtgcgtcaggccatgaccgtgattccgcgcgaccagcataccctttcg
cgcagtgatatcagcgaaaatgcgctgaaggtactctatcgcctgaacaaatcaggctat
gaagcctatctggttggcggcggcgtcagagatctgctgctggggaaaaagccaaaagat
ttcgatatcaccaccaatgcgacgccggagcaggtgcgtaaattatttcgcaattgccgc
ttggttggccgccgcttccgtctcgctcacgtgatgtttggtcctgaagtgattgaagtc
gcgacctttcgcggtcatcacgagcagcatcaggagcagcagcttaaaaccacctcgcag
caggcacagagcggcatgctgttacgtgataatattttcggcagcattgaagaagatgcg
cagcgccgcgatttctccattaacagcctctattacagcgtcgccgatttcagcgtgcgt
gattacaccggcgggttgaacgatctgcgccaaggggtgatccggttgattggcgatccg
gaaacccgctatcgggaagatccggtacgcatgctgcgcgccgtgcgtttcgccgccaaa
ctgaacatgaccatcagcccggaaactgccgagccgattccgcgtctggcgacattgctg
cacgatatccccgccgcacgcctgtttgaggaatcgctgaagctgttgcaagcgggttac
ggttacccgacgtaccgtttgctgtgcgaataccaactgtttcagccgctgttcccgctg
atcagccgccattttacgcctaacagcgatagccatctggaaaaaatggtggcgctggtg
ttaaagaacaccgaccagcggctgcaaaatgacatgcgcgttaacccggcatttctgttt
gccgccatgctgtggtatccgttgatcgagcatgcgcagaaactggcgcaagaaagtgga
ttaacctacttcgactccttcgcactagccatgaacgatattctggacgaacagtgccgc
tctcttgccattcctaaacgcatcacctcgttagtgcgtgatatctggcagttgcagttg
cgcctgtcgcgccgtcagggcaaacgcgcctacaagctgatggagcacccgaaattccgt
gctgcctacgatttgttgagcctgcgtgccgaaattgagcgtcagccagagctgcaacgt
ctctctcaatggtggggagaattccaggtcgccacgttgccgcgccagcaagccatgctc
agcacgctggatgatggccctacgccacatcgccattcccgacgccgtaagccgagtgcg
ccgcgcagagaaagaacctcgtga
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