Symbiopectobacterium purcellii: K6K13_16840
Help
Entry
K6K13_16840 CDS
T07463
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sym03016
]
K6K13_16840 (truD)
Enzymes [BR:
sym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K6K13_16840 (truD)
Transfer RNA biogenesis [BR:
sym03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6K13_16840 (truD)
Prokaryotic type
K6K13_16840 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QZN98130
LinkDB
All DBs
Position
complement(3592119..3593156)
Genome browser
AA seq
345 aa
AA seq
DB search
MESLFWLHGEPLATGTLKASADDFRVVEDLGFAPDGDGEHLLVQVRKRGCNTAFVAEALA
KFARIPARAVSYAGLKDRHAVTEQWFCLHVPGKVLPDFSAFALEGCEILNSARHRRKLRI
GALRGNQFTLTLRNISDRAAVEARLAAIAEQGVPNYFGSQRFGRGGNNLIQAARWAREEI
RVSERSKRSFYLSASRSALFNLIVSQRLSQGLATQVLAGDALQLAGRGSWFVANEDEVTV
LQSRVDKFELCVTAPLPGDGDPGTHGDALAFEQRCLAGHETLLGLLRRERVEVARRAALL
YPQQMRWSWLDETSVTLDFWLPAGSFATSVVRELITPLEQMDIAD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcctgttctggctgcacggtgaaccgctggcgacagggacgctcaaagcaagc
gccgatgatttccgtgtggtggaagatttggggtttgcgccggacggcgatggcgaacat
ctgctggttcaggtgcgtaaacgtggctgcaacaccgcgtttgtggcggaagcgttggcg
aaattcgcccgcattcccgcgcgtgccgtgagttatgctggcttgaaagaccggcatgcg
gtgacggagcagtggttttgcctgcatgtgccgggcaaagtgttacccgatttctccgcg
tttgcgcttgaagggtgtgaaattcttaacagtgcccgtcatcggcgtaagctgcgtatt
ggtgcgttgcgtggcaatcagtttacgttgacgctgcgtaatatcagcgaccgtgcagcc
gtcgaagcgcggctagcggcgattgctgaacagggcgtgccgaactattttggcagtcag
cgcttcggtcgcggtggcaacaacctgattcaggcggcacgttgggccagagaagagatt
cgcgtcagtgagcgcagcaagcgtagcttctatctgtcggccagtcgtagcgcgctgttc
aatctcattgtgagccaacgtttgagtcaggggttggcaacgcaggtgttggcaggtgat
gcgctgcaacttgccgggcgtggtagttggtttgtggcaaacgaagatgaagtgacggta
cttcaatcgcgcgttgataagttcgagctgtgcgtgacggctccgctgcccggcgatggc
gatcctggcactcatggtgacgcgttggcgtttgaacagcgctgcctggcggggcacgag
acgctgcttggattactgcgtcgcgaacgggtcgaggttgcgcgccgtgctgcactgctg
tatccgcagcaaatgcgctggtcctggttggatgaaacgtcggtcacgctggatttctgg
ctaccggcgggcagctttgccacaagcgtagtgcgcgaactcatcacgccgctggagcag
atggatatcgctgattga
DBGET
integrated database retrieval system
