Symbiopectobacterium purcellii: K6K13_19015
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Entry
K6K13_19015 CDS
T07463
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym03030
DNA replication
sym03430
Mismatch repair
sym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6K13_19015 (dnaE)
03430 Mismatch repair
K6K13_19015 (dnaE)
03440 Homologous recombination
K6K13_19015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sym03032
]
K6K13_19015 (dnaE)
03400 DNA repair and recombination proteins [BR:
sym03400
]
K6K13_19015 (dnaE)
Enzymes [BR:
sym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6K13_19015 (dnaE)
DNA replication proteins [BR:
sym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6K13_19015 (dnaE)
DNA repair and recombination proteins [BR:
sym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6K13_19015 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MJ0607
Motif
Other DBs
NCBI-ProteinID:
QZN95276
UniProt:
A0ABX9AKD1
LinkDB
All DBs
Position
complement(4101529..4105011)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GLKPIIGADVLVSSDALGDELAQLTLLAMDNEGYQNLTLLISHAYQRGYGAEGPTIERDW
LIEYGKGLLLISGARHGDVGKFILRGNQALVEQSLAFYQEHFPGRYYLELIRTGRPDEES
YLHAAIELAMKHHLPVVATNDVRFINADEFDAHEIRVAIHDGYTLDDAKRPRNYSAQQYM
RSEDEMCELFADIPESLVNSVEIAKRCNVTIRLGEYFLPQFPTGDMSTADFLVKRAREGL
EERLAFLFPDEEVRKQRRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYSLKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LQEIYDADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRARQEQEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEDGAKKMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNNDGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLNDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYSTVAPWPEQVVLDGERETLGLY
LTGHPITQYLKEIERYAAGLRLKDMHPTDRGKVTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEVMLFTEALDKYQHLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDACARLRFGAAWRVTPTD
VLLNDLRTLLGNTQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgtccatctgcgtgtgcacagtgactattccatgatcgatggg
ttggcaaaagttgggccgctggtaaaaaaggcggccgcgctgggcatgccagccctggcg
atcacggatttcaccaacctgtgcgggttggtgaaattttacggcggcgcacacggtgcg
ggccttaaacctatcatcggcgccgatgttctggttagcagcgatgcgctgggcgatgaa
ctggcgcaactcaccctgctcgccatggacaacgagggctatcaaaacctcaccctgttg
atctcccatgcctatcagcgcggctacggtgctgaaggccccaccatcgaacgcgattgg
cttatcgaatacggtaaaggcttactgctgatttcgggggcccggcacggcgacgtgggc
aaatttatcctgcgcggtaaccaggcgttggtcgagcagagcctggccttttatcaagag
cactttccgggccgctattacctggaactgattcgcaccggtcgcccggatgaagagagc
tatcttcatgcggcgattgaattagccatgaaacaccatttgccggtggtggcgaccaac
gatgttcgattcatcaatgccgatgaatttgatgcccatgagattcgcgtcgccattcac
gatggctatacgctcgatgatgcaaaacgtccccgtaattacagcgcgcagcaatatatg
cgcagtgaagacgagatgtgtgagctgtttgccgatattccagagtcgctggttaacagc
gttgagatcgccaaacgctgtaatgtcaccatccgtctgggagaatattttctaccccaa
ttcccgaccggggatatgtccactgcggattttctggttaaacgtgctagggaagggctg
gaggagcgtctcgctttcttgtttcccgacgaagaggtgcgtaagcagcgtcgcccggaa
tacgacgaacgtctggaaattgaactcaatgttatcaaccagatgggatttcctggctac
ttcctgatcgtgatggagtttatccagtggtcaaaagataatgacgtcccggtagggccg
gggcgcggctccggtgccggctcgctggtggcctactcactgaaaatcaccgatctcgac
ccgcttgaatttgacctgctgttcgaacgttttcttaacccggaacgcgtatcgatgcct
gactttgacgtcgacttctgtatggagaagcgtgacctggttatcgatcacgtcgcggag
atgtacgggcgtgatgcggtatcgcagatcatcaccttcggtaccatggcggccaaagcg
gttattcgcgacgtagggcgcgtgctcggacacccttacggttttgtcgaccgaatttct
aaactggtgccacccgatccgggcatgacgctggaaaaagcgtttgctgccgaaccgcag
ctacaggaaatttacgacgccgacgaagaagttaaagctcttatcgatatggcgcgcaaa
ctggaaggggtgacgcgcaacgcgggtaaacacgccggtggggtggtaatatcgccgacc
aaaatcaccgatttcgcaccgctctattgcgattcggaagggaatcatccggttacccag
tttgacaagaacgatgtggaatatgccgggctggtgaaatttgacttcctgggcctgcgc
acgctgaccatcatcgactgggcgctggagatgatcaacgcccgtcgtgccaggcaggag
caggagccgattgatatcgcggccatcccgctcgacgataaaaaaagtttcgacatgctg
caacgttcggaaaccacggcggtgttccagcttgaatcgcgtggcatgaaagacctgatc
aaacgtttgaagccggactgctttgaagacatgatcgctctggtggcgctgttccgtccg
gggcctttgcagtcagggatggtggataacttcatcgaccgtaaacacggacgtgaagaa
atctcctatcctgatatacagtggcagcatgaatcgctgaagccggtgctggagccgacc
tatggtatcatcctgtaccaggaacaggtgatgcagatagcccaggtgctttccggctat
acgctgggcggcgcggatatgctgcgccgcgctatgggtaagaaaaaacccgaagaaatg
gctaagcagcgctccgtgtttgaggacggcgctaagaagatgggggtcgacggcgaactg
tcgatgaagatcttcgacctggtggaaaaatttgccgggtatgggtttaacaagtcgcac
tcagccgcgtacgccttggtatcgtatcaaacgctatggctcaaggcgcattatcctgct
gaattcatggctgctgtgatgacggcagatatggataacaccgagaaagtggtgggactg
gtggacgagtgctggcgtatggggttaaaaatcctgccgccggatatcaacagcgggctg
taccattttcacgtgaataatgacggggaaattgtttatggtatcggcgcgatcaagggc
gttggtgaaggaccgatagaagcgatcatcgatgcgcgaaatcagggtggttatttccgc
gaactgttcgatctctgtgcccgtactgatatcaagaaactgaatcgccgcgtactggaa
aagctgatcatgtccggtgcgtttgatcggctggggccgcatcgcgcggcgttgatgaat
tcactcaacgatgcgttgaaggctgccgatcagcatgccaaggccgaagctatcggccag
gtagatatgtttggtgttctggcggaagcgccggagcaggtagaacagtcctacagcacg
gtagctccctggccagagcaggtggtgttggacggtgaacgggaaacgttagggctttat
ctgacgggtcacccaatcacgcagtatctcaaggaaatagaacgctatgctgctggcttg
cgtttgaaggacatgcacccgacggatcggggcaaagtaacaacggcggtcggcctggtg
ctggctgcccgcgtaatggtcaccaagcgaggtaatcgcattggcgtatgtacactggac
gatcgttccggccgtttggaagtgatgctgtttactgaagcgttggataagtatcagcat
ctgcttgaaaaagaccgaattctgattgtcagtggacaggtcagctttgatgactttagc
gggggccttaaaatgatggcccgtgaggttatggatatcagtgaagcgcgtgaaaaatat
gcgcgtgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaacctcaccgatcggggacgatcccggtacacctttattaccag
cgagaggatgcctgcgcccggttacgttttggcgcggcatggcgtgtgacgccaaccgat
gtgctgcttaatgacctgcgcacactgctggggaacacccaggtggaactggaatttgac
taa
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