Symbiopectobacterium purcellii: K6K13_19285
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Entry
K6K13_19285 CDS
T07463
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6K13_19285 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sym03400
]
K6K13_19285 (recD)
Enzymes [BR:
sym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K6K13_19285 (recD)
DNA repair and recombination proteins [BR:
sym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6K13_19285 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_28
AAA_16
DEAD
PhoH
UvrD_C
MukB
AAA
SRP54
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_24
CbiA
Motif
Other DBs
NCBI-ProteinID:
QZN95322
LinkDB
All DBs
Position
complement(4158725..4160578)
Genome browser
AA seq
617 aa
AA seq
DB search
MMDLLATAMERQLLRPLDVQFADMLTDGQPTPVQLAAALVSAGAGAGNVCLPLTELHPDS
LFDGRDPALAHALWALAGLPDSAAWQQHLLASPAVSDGRETTPLVLQHQRLYLQRNWLSE
VQVAAFFTENHLVDIHTDPLAIRRVLDRLFSPVDAEVDWQKVAAAVALTRRVSVISGGPG
TGKTTTVAKLLAAMLLLHEGDRPLRIQLAAPTGKAAARLTESLRSVLSKLPLEEAQQRHL
PREATTLHRLLGAVPDSQRLRYHQGNPLHLDVLVVDEASMVDLPMMANLVLALPVTARVI
FLGDRDQLASVEAGAVLGDICRFAARGYSAQRVEELEPLTGYRLAASSEASPAVADSLCL
LKKSYRFDQHSGIGIVARAVNGGDERQVRQVLQDKHDDLHCMPLAQEEDYQQMVAQCVAG
YSDYLQAVSQRQDAAQVLAAFNRFRLLCALRDGPFGVAGLNARIEQALQQAGLIHRGRNP
TNPWYSGRPVMIARNDALLGVFNGDIGIAMPNEAGELRVYFQLPDGQMKPVSPSRLPPHE
TAYAMTVHKSQGSEFDHTALVLPNGFLPVLTRELLYTAVTRARAQLSLYAEISILCRAVR
TPTRRFSGLETRILSGT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatggacttgctggcgacggcgatggagcgccaactgctgcgcccactggatgtacag
ttcgcggatatgctgaccgatggacaacccacaccggtgcaactggcggcggcgttggta
agcgcgggggcgggggcgggcaacgtctgtttaccgttaacggaattgcaccctgattcc
ctgtttgatggtcgcgatcctgcattggcgcatgcgctgtgggcgctcgcagggctaccg
gatagtgcggcgtggcagcaacacctgctggcttcgcccgccgtgagcgatggccgtgag
accacgccgctggtgttgcagcaccaacggctttatttgcaacgcaattggctgagtgaa
gtgcaggtggctgccttttttaccgagaatcatctcgttgatattcataccgatcccctt
gctatacgtcgcgtgttagaccgcttgttttcaccggttgatgctgaggttgattggcaa
aaggtggctgccgctgtagcgctgacgcgccgggtctcggtgatttccggcggaccgggc
acgggaaaaaccacgacggtggctaaactgctggctgccatgttgttgctgcatgaaggg
gataggccgttgcgcatacaactggcggccccgacaggaaaagccgccgcgcgtttgacg
gagtcgctgcgcagtgtgttaagcaaactgccgctggaagaggctcagcagcgtcatttg
ccgcgggaagcgactacgctgcaccgtctgttgggcgcggtgcctgacagccaacgcttg
cgctatcatcagggcaatccgctccatcttgatgtgttggtggtggatgaagcctcgatg
gtggatctgccgatgatggcaaacctggtattggcactgcctgtgacagcacgggtgatt
ttccttggcgatcgcgatcaattggcctccgttgaggctggagcggtattgggcgatatc
tgccgttttgccgcgcggggctatagcgctcaacgcgttgaggaactcgaaccgctgaca
ggctatcggttggctgcctcatctgaagccagccccgcggtggcagacagtttgtgcctg
ctgaaaaagagctaccgattcgatcagcactccggcattggcattgtggcgcgcgcggta
aatggtggcgatgagcgtcaggtccggcaggtgttgcaggataaacatgacgatctgcac
tgcatgccgctggcgcaggaagaggattaccagcagatggtggcacagtgtgtagcgggg
tatagcgactatttgcaggcggtatcacagaggcaggacgccgcacaggtgctggcggca
tttaaccgttttcgtttgttatgcgcactgcgtgacggcccgtttggtgtcgccggttta
aatgcgcgtattgagcaggcgttgcaacaggccgggttgattcatcgcggccgtaatccg
acgaatccctggtactctggccgaccggtcatgattgcacgtaatgatgcgctgcttggc
gtgtttaacggcgatattgggatcgccatgccgaatgaggcgggggagctgcgcgtttat
ttccaactgccggatggtcagatgaaaccggtcagcccgagccgcttgccaccgcatgaa
accgcctacgccatgaccgtgcacaaatcacaaggttcggaattcgatcataccgcactg
gtgttgccgaacggctttttaccggtgttgacgcgcgaattgttgtacaccgcggttacg
cgcgcgcgcgcgcaactgtcgctctacgccgagataagcatcttgtgtcgcgcggtgaga
acaccgacgcgtcgctttagcggactggaaacacgcatactttccggtacttga
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