Symbiopectobacterium purcellii: K6K13_19300
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Entry
K6K13_19300 CDS
T07463
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K6K13_19300 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sym03400
]
K6K13_19300 (recC)
Enzymes [BR:
sym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K6K13_19300 (recC)
DNA repair and recombination proteins [BR:
sym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6K13_19300 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QZN95325
LinkDB
All DBs
Position
complement(4167239..4170631)
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AA seq
1130 aa
AA seq
DB search
MFRVYHSNQLDILKTLMVTLIARQPLQDPFQPETILVQSPGMAQWLQIELATHFGIAANL
HFPLPGVFLWDMCRRVLPDIPAENTFSKEAMTWKLMHILPQQQDNPSFLPLSHYLQDDAD
KRKRHQLAGRVADLFDQYLIYRPEWIKQWQAGALVDGLGDAQVWQAELWRALLQYSAQLE
QKEWHHARLYQRFIEMLEQATTCPQGLPPRVFICGISALPPVYLHALRALAKHIDVHLLF
TNPCRDYWSDIQDRHFLAKLKSRQRRLHSNSLSAEEQYRPLFRDPANVDGLFNDEGEQRI
VNPLLASWGKLGRDHLYQLAQIDEVDDIEAFVELDGITLLQQVQRDILELDDGSVIADSA
QAQASSERKRLLTPQDASLTFHACHSPQREVEVLHDQLLAMMAEDETLTPRDVIVMMADI
DSYTPFIQAVFGNAPTARYLPFAISDQRARHAHPVLPAFLSLLELPHSRFTAEQVLSLLE
VPALSARFGIDEEGLRRLRLWVMESGVRWGLDDDNVRDLDLPVTGQHTWRFGLTRMLLGY
AMNSSSGAWQGVLPYDESSGLIAQLVGQLAELLAQLSQWRQRLRVARTPAQWLPLCRQLL
DDLFIADSDSDAALSLIEQQWQAMLGAAVANAFEEAIPVALLRDDLSQRLDREKLSQRFL
AGAINFCTLMPMRSIPFKVVCLLGMNDGVYPRSLPRLGFDLMAQKGQRGDRSRRDDDRYL
FLEALISAQQRLYISYIGRAIQDNTQRYPSVLVSELMEYLAQSYHLPGDEAQDLDTSAAR
VCAHLCCEHTRMPFDKDNFLEHAQPCSFASEWLAAAGRAGLPQPLFDTPLEPITYSDITL
DALKRFYRHPVKTFFQARLGVNFVVQNDELLDEEPFALDNLSRYQLNAQLLNVLIAQEDA
DELLHRARAAGELPYGAFGELYWQKQRQEMQALADSVSTERDAAGMTSLEVDMTLDGVRL
SGWVMQVQRDGLLRWRPARLGMKDGVALWLDHLAYCLAGGLGESRMYGREETVWRFAAVS
VDEAQRQMAHMIEGYQQGMNAPLLLLHQSGGAWLQACYDASSGTLNDASDVVQKALNKLQ
QSWAGNMMLPGEGDDFYLQRIVPELDEARIEAIVTAAKTWLLPILRANQA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgttcagggtttatcactcaaatcagttagatattttgaaaacgctgatggtgacgctg
atagcgcgccaaccgttacaggaccctttccagcctgaaacgatcctggttcaaagccct
ggtatggcacaatggttacagattgaacttgccactcactttggtattgctgccaatttg
cattttcctttgcccggtgtttttttgtgggacatgtgtcggcgcgtgttaccggatatc
ccggcggaaaacacctttagcaaagaagcgatgacctggaagttaatgcatattttgcct
cagcagcaggataatccgtcattcttgccgttgagtcactatttgcaagatgatgccgat
aaacgcaagcggcatcaactcgccgggcgagttgcagatctgttcgatcaatacctgatt
tatcggcctgagtggatcaaacagtggcaagccggtgcgctggtggacgggttgggggat
gcgcaggtgtggcaagccgagctgtggcgtgcacttttgcaatacagcgcgcaacttgaa
cagaaagagtggcaccacgctcgcctttatcagcgctttatcgagatgctggagcaagcc
actacctgcccgcaagggttaccgccacgcgtgtttatctgcggtatttcagcgctaccg
ccggtttatttgcacgcgctgcgtgcattggcaaagcatattgatgtgcatctgctgttt
actaacccatgccgggattactggagtgatattcaggatcgccattttttagcgaagctg
aaaagtcgtcagcgtcgcttgcacagcaacagcctcagcgccgaggaacaataccgtccg
ctgtttcgcgatcctgccaatgttgatgggttgttcaacgatgagggcgaacagcgcatt
gtgaatccgctgctggcaagctggggaaaactggggcgtgatcatctctatcagttggcg
cagatcgacgaggtcgatgatattgaagcctttgtcgagcttgatggcataacgctattg
caacaagtgcagcgcgatattctggaacttgatgacggcagcgtgattgccgatagcgca
caagcgcaggctagcagtgaacgtaagcgcctgcttacgccgcaggatgcttctctcact
tttcacgcctgccacagtcctcagcgtgaggtcgaagtactgcacgaccaactgctggca
atgatggcagaggatgaaacactcacgccgcgtgatgttatcgttatgatggcggacatt
gatagttatacgcctttcattcaggcggtgtttggtaatgcgccgacagcgcgctatttg
cctttcgctatctccgaccagcgagcccgccacgcgcacccggttttgcctgcatttctc
agcctgttggagttgccacacagtcgttttaccgccgagcaggtgctgtcgctgcttgaa
gtccctgcgctttctgcccgttttggtatcgacgaagaagggctgcgtcgtttgcggctg
tgggtgatggaatctggcgtgcgctgggggcttgatgatgacaacgtgcgcgatcttgat
ttgccggtcaccggccagcatacctggcgttttggtctgacacgcatgctgttgggctat
gcgatgaacagcagttcgggggcctggcagggcgtgttgccctatgatgaatcgagtggg
ttgattgcccaactggtggggcaattggcggagttattggcgcaactcagccaatggcgt
cagcgtttacgggtagcgcgcacgccagcgcaatggctgccgctgtgtcggcaactgttg
gacgatcttttcattgcggatagcgacagcgatgccgcgctgtctttgattgagcagcaa
tggcaggcgatgctgggggcggcagtcgccaatgcgtttgaggaggcgatcccggtggca
ttgttgcgtgacgatttgtcccaacgcttggatcgggaaaaactgagtcaacgctttctc
gccggtgccattaacttctgtacgctgatgccgatgcgttcgatacccttcaaagtggtc
tgtctgctggggatgaacgatggggtgtatccgcgctcgctgccccggttggggtttgac
ctgatggcgcagaaagggcaacgcggtgaccgcagccgtcgtgatgatgaccgttatttg
tttctggaagcgttaatctcggcgcaacagcgcctctatatcagttacatcggtcgcgcc
attcaagataacacgcagcgttatccctccgtgttggtgagcgaactgatggagtattta
gcgcaaagttaccatttgccaggggatgaggcgcaggatctggataccagcgcggcacgc
gtatgtgcgcatctgtgctgcgagcatacccgtatgccgtttgacaaggataactttctt
gaacacgctcaaccgtgcagcttcgccagtgaatggcttgccgcggctgggcgcgctgga
ttgccgcagccgctgtttgatacgccactggagcctatcacttactccgatattacgctg
gatgcgttgaaacgtttttatcgccaccctgtcaaaacctttttccaagcgcgtttgggc
gtgaactttgtcgtgcagaacgatgaactgctcgatgaggagccattcgctttggataac
ctcagtcgctatcagttgaatgcgcaattactgaatgtgctgattgcgcaagaggatgcg
gatgaactgctacaccgagcccgcgcggcgggcgagcttccctatggcgctttcggtgag
ttgtattggcaaaaacagcgccaggagatgcaagcgctggctgacagcgtcagcacggag
cgtgatgcggcgggaatgaccagcctggaagtggacatgacgctagacggtgtacgcctg
agtggttgggtgatgcaggtacagcgcgatggtctgttgcgctggcgcccagcgcgttta
ggcatgaaagatggcgtggccctgtggttggatcatctggcgtactgcctggcgggaggt
ttgggagagagccgcatgtatggccgtgaagagacagtctggcgctttgctgcagtttct
gtggacgaagcacaacgccagatggcgcatatgattgaaggatatcaacaaggcatgaat
gccccactattattactgcaccagagcggaggggcttggctgcaagcatgctacgatgca
tcaagtggcacgttgaacgatgcctccgatgtggtgcagaaagcgttgaacaagctgcaa
caaagctgggctggcaacatgatgttgcccggtgaaggcgatgatttctatttgcagcgt
atcgtgccggaactggatgaagcccgcattgaggcgattgttacagcggcaaaaacctgg
ctgttgccgatcctgcgcgccaatcaggcataa
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