Symbiopectobacterium purcellii: K6K13_21505
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Entry
K6K13_21505 CDS
T07463
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym00040
Pentose and glucuronate interconversions
sym01100
Metabolic pathways
sym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K6K13_21505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6K13_21505
Enzymes [BR:
sym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K6K13_21505
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QZN95692
UniProt:
A0ABX9AKJ6
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All DBs
Position
4609679..4610803
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AA seq
374 aa
AA seq
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MKHVLLSLTAGLLTLTVQGAFAANTGGYATTDGGDISGAVKKTAHSMQDIVDIIEAARVD
SNGKKVKTGAYPLVITYDGNEDKLINAAAADICSQWSKPARGVEIKEFTKGITILGTNGS
SANFGIWLVKSSDVVIRNMRFGYMPGGASDGDAIRVDNTPNVWVDHNEIYAKNYECPGTP
DGDTTFESAVDIKKASTNVTVSYNYIHGIKKVGLSGSSSSDTGRNLTYHHNVYSDVNARL
PLQRGGQVHAYNNLYSGITSSGINVRHKGLALIERNWFENAVNPVTSRYDGSNFGTWVLR
DNNVTSAAQNATYNITWTSDSKAYVNAEDWTSTGTFPSLPYSYSPVNAQCVKAKLAQFAG
QGKGLAVLTTAACN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgttttactttcactaaccgcagggctgctgacattgaccgtacaaggtgcg
tttgccgcgaataccggcggctatgccaccaccgacggcggcgatatttctggtgccgta
aaaaaaaccgcccactccatgcaagatattgtcgatatcattgaagccgcccgcgtggat
agcaacggtaagaaagtcaaaaccggcgcgtatccgctggttatcacctatgacggcaac
gaagataaactgatcaatgccgccgctgccgatatttgcagccaatggagcaagcctgct
cgcggggttgaaatcaaagagttcaccaaagggataaccatccttggcaccaatggctca
tccgccaactttggtatctggttagtgaaatcgtccgatgtcgtgattcgtaatatgcgt
ttcggctacatgccgggcggcgccagtgacggcgatgccattcgcgttgataacacgccg
aacgtctgggttgatcataacgagatctacgccaagaactatgagtgccccggcacaccg
gatggcgataccacatttgaatcagccgtcgatatcaagaaagcatcgaccaacgtgacg
gtttcctataactatattcacggtatcaaaaaagtcggattaagcggctcgagcagcagc
gatacaggccgtaatctgacttaccaccacaacgtctacagtgatgtgaacgcccgcttg
ccgttgcaacgcggagggcaagtgcatgcctataataacctctactccggtattaccagt
tcagggataaacgtgcgccataaagggctcgcgctgatcgaacgtaactggttcgaaaat
gccgttaaccccgtgacatcgcgctatgacggctccaacttcggtacctgggttctgcgt
gataacaacgtcaccagtgcagcccaaaacgccacgtataacatcacctggaccagcgat
tccaaggcctacgttaacgctgaggattggacctctaccggcactttcccctcgctgcct
tacagctactcaccggtcaacgctcagtgcgtgaaagcgaagctggcacagttcgccggt
cagggaaaaggcttggcggtgctgacgacggctgcgtgtaactaa
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