Symbiopectobacterium purcellii: K6K13_22660
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Entry
K6K13_22660 CDS
T07463
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sym
Symbiopectobacterium purcellii
Pathway
sym00040
Pentose and glucuronate interconversions
sym01100
Metabolic pathways
sym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K6K13_22660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6K13_22660
Enzymes [BR:
sym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K6K13_22660
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GFIT
Motif
Pfam:
Pectate_lyase_2
Glyco_hydro_88
Beta-AFase-like_GH127_cat
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QZN98213
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Position
4873920..4875629
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AA seq
569 aa
AA seq
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MKNLSLSLAAFCCMAALATQAHSADRLTIVKQYADTVLDKAGDHYHGTQPSPLLASGVDP
RTGKQLEWIFPDGRTAVLSNFSAQQNFMRVLVGLSNLTGDERYQQRAKTSVRYYFDRYQD
KSGLLIWGGHRFVDLKTLQPEGPSEKELVHELKNAYPYYELMFAVDKPATVRFIRAFWNA
HVYDWQILETSRHGQYGKEIGKLWDNSFTQQPPFFATKGLSFLNAGNDLIYSASLLYKNN
QEAGALVWAKRLAEQYVLPRDKKTGLGVYQFTQALKRAETSDDSDTNSKYGDRAQRQFGP
EFGPAALEGNMMLKGRTSTLYSENALMQLQLAKDLGKDGDDIKKWTLDGLKAFAKYAYDE
SNNTFRPMLANGTDLSNYTLPRDGYYGKKGTVLKAYPASSDFLLSYARAYTLEKDADLWK
VARGIAKGLDLGDIGSAPGKGVSVNVSTKNSDPYAIFALIDLWQATQDKTYLTVAEKVAD
NIVSNNLHNGFFMNSAKYQYASIDSIDPYALLALEATLKNKPQAVAPFLNGSGFTEGAYR
MPDGSARVSTRDDELFALKEGETLKSNGK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctatccctctctttggccgctttctgctgtatggcagcactcgccactcag
gcgcacagcgccgatcgtttaactatcgtaaaacagtatgccgataccgtactggataaa
gccggcgaccattatcacggcacgcagccatcaccgttattggcaagcggtgtcgatccg
cgcacagggaaacagcttgagtggattttccccgatgggcgcaccgctgtgctctccaat
ttttctgctcagcaaaactttatgcgcgtattggttggcctctctaacctgacgggtgat
gagcgttatcaacagcgcgccaaaaccagcgtacgttactatttcgatcgctatcaggat
aaaagcggcctgctgatttgggggggacaccgttttgtcgatttgaaaacgcttcagcca
gaaggaccgagtgaaaaagagctagtgcatgagctgaaaaatgcttacccctactatgaa
ttgatgtttgccgtggataagccagcaacagttcgcttcattcgcgcattctggaatgcc
cacgtttatgactggcaaatcttggaaaccagccgccacggtcagtacggtaaggagatt
ggtaaactgtgggacaacagcttcacccagcaacccccgttcttcgccaccaaagggctg
agtttccttaacgccggtaatgacctgatctattccgcctccctgctgtataaaaacaac
caggaagcgggtgcgctggtgtgggcaaaacggctggcggagcagtacgtattgccgcgc
gataaaaaaaccggtctgggcgtttaccaattcactcaggcattaaaacgcgctgaaacc
agcgatgatagcgacaccaactctaaatacggtgaccgtgctcagcgtcagttcggacca
gagtttgggcctgctgcgttggaaggcaacatgatgctgaaaggacgcaccagcacgctc
tattccgagaatgcgctgatgcagctacagttggcgaaagatttaggtaaagacggcgac
gatatcaagaaatggacgctggacggcctcaaagcatttgccaaatacgcctatgacgaa
agcaacaacaccttccgtccgatgctcgccaacggtaccgatctctccaattacacgctg
ccgcgtgacggttactacggtaagaaaggcacggtgctgaaagcctacccggccagcagt
gatttcctgttgtcctacgctcgcgcttacacgctggagaaagatgccgatttgtggaaa
gtggcgcgcggtatcgccaaggggttggatctgggggatatcggctcagcgccgggtaaa
ggcgttagcgtcaatgtcagcaccaaaaacagcgatccctatgctatttttgcgctgatc
gatctgtggcaggcaacgcaggataaaacctacctgaccgtagccgaaaaagtggccgat
aacattgtcagcaataatctgcacaacggcttctttatgaactccgccaaatatcaatat
gcgtccattgatagcatcgacccatacgcactgctggcgctcgaagccacgctgaagaac
aaaccgcaggccgttgccccgttccttaacggctccggcttcaccgaaggggcttatcgc
atgccggacggcagcgcccgcgtctccacccgtgatgatgagctgtttgccctgaaggaa
ggggaaaccttaaaatcgaacggtaaataa
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